TTTATTAANCTCATAATTGCGGCCGCTATACGACTCCTATTCGAGAGGAC
CGCGGAATTCTACAGTAGATGATATGCCTTCTTTATTAGCATGGCCAGAA
TGGGTCAAGGTTGGTTTGGCTGTTGATTCCTAGGGTCCCAGNTGGGATGG
TTGCAAATCAAAAGNCCTATTCTCATAAATTATCTTTTCTTGGGGCTCAG
GGTAAACCATGGTCCTTCCCTCCTGGGTCTTTTGGGTGCACTGGCACTTC
CCCCTTTGGTTGAACTTTACCTTAAAAAACCCCTGGGGCTTCCACAACCC
CTTTTTTTTTATAACCCCCTTCCCCTAAAAGGGGTGCCCCCCCAAAAATT
TCCCCCTTTTTATTTTTAAAAAAATTTTTCTTTCCCCCAAAAATTTTTTT
CCCCCCCCCCCCCGTTTTTTTTTTTTTTTNTGTTGGTAGATACCTCTTCT
GAGCCTACACGCGCCATTCTTGTTTTTTCTTATGTTTATCTATCCTTTAC
TTTATTTTTAAGTTTTTTATTANNATTTAGACTTTTATTTTAGAACATCA
TACTATTCACTTTTTCTTTCGCNTCATTTGTCTTCATATGAGGNTTGCAT
GTCATTG

CCCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCAGAGCAAAGCACCAGACT
GATTTTGTTTGTGTCATATGATCCTTGACTATGAAGAGCAAAAAGCTATG
ATTGTCATCAAGCATTCACAAAACATCTGGGAGCTGCCTATGGTAAGTGA
GAATACTGGTCCTGGAAGTTATCACTGGGCAGACAGAATGGGGGATTTCT
ACTACAGTCACTGATCAGTGGAGGATGCAATTGTCATTCTGACTTTATAT
AATAAATATCCATATCTGTGTAAAAAACCTGTATTATAATATAATAAAAC
CCCTTAACTTTTACCTGTTAATAAAAACAATCTTAAAACTAAAATTATAA
TGTGACATTCTAAGAAAGCAAATCTTACTTGAGAGAGAAAATTCATAGGG
AGAAAAAGTGTGCAATTATATGGATTGAGATGAAAGAAAGGGAAGAGTTT
TAAAAATTGCTTAGGAATGTATGTTTGATGCCTACTTGATATGTAGTGCA
TAAGAAAAAGATATATATTTACCTAAAGGTTAATAGCAAGAAAATAATAA
CCTCAATAAAAACACAGGCCTCAGAGTCCATATTTCTTCATGATCTCTCA
ATGTATATACATTTTATGCTGTCAAAAACAATAGAGTCAGCTATGCTTAA
GTTTATGGCCCTGGAGAAGCCTGACAAGACTGAGCATTTTACAGAACCTG
GGCAG

Query= MSMg01no452_n08.g1 MSMg01no452_n08.g1 CHROMAT_FILE:
MSMg01no452_n08.g1 PHD_FILE: MSMg01no452_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:31 2005
         (628 letters)



>mm_chr2_116072914_116073939
          Length = 1026

 Score = 1176 bits (608), Expect = 0.0
 Identities = 623/628 (99%), Gaps = 2/628 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccagagcaaagcaccagactgattttgtttgtgtcatatgatccttgactatgaagagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ccagagcaaagcaccagactgattttgtttgtgtcatatgatccttgactatgaagagca 767

                                                                       
Query: 61  aaaagctatgattgtcatcaagcattcacaaaacatctgggagctgcctatggtaagtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aaaagctatgattgtcatcaagcattcacaaaacatctgggagctgcctatggtaagtga 707

                                                                       
Query: 121 gaatactggtcctggaagttatcactgggcagacagaatgggggatttctactacagtca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gaatactggtcctggaagttatcactgggcagacagaatgggggatttctactacagtca 647

                                                                       
Query: 181 ctgatcagtggaggatgcaattgtcattctgactttatataataaatatccatatctgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ctgatcagtggaggatgcaattgtcattctgactttatataataaatatccatatctgtg 587

                                                                       
Query: 241 taaaaaacctgtattataatataataaaaccccttaacttttacctgttaataaaaacaa 300
           ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 586 taaaaaa-ctgtattataatataataaaaccccttaactttt-cctgttaataaaaacaa 529

                                                                       
Query: 301 tcttaaaactaaaattataatgtgacattctaagaaagcaaatcttacttgagagagaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tcttaaaactaaaattataatgtgacattctaagaaagcaaatcttacttgagagagaaa 469

                                                                       
Query: 361 attcatagggagaaaaagtgtgcaattatatggattgagatgaaagaaagggaagagttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 attcatagggagaaaaagtgtgcaattatatggattgagatgaaagaaagggaagagttt 409

                                                                       
Query: 421 taaaaattgcttaggaatgtatgtttgatgcctacttgatatgtagtgcataagaaaaag 480
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 taaaaattgcttaagaatgtatgtttgatgcctacttgatatgtagtgcataagaaaaag 349

                                                                       
Query: 481 atatatatttacctaaaggttaatagcaagaaaataataacctcaataaaaacacaggcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 348 atatatatttacctaaaggttaatagcaagaaaataataacctcaataaaaacacgggcc 289

                                                                       
Query: 541 tcagagtccatatttcttcatgatctctcaatgtatatacattttatgctgtcaaaaaca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tcagagtccatatttcttcatgatctctcaatgtatatacattttatgctgtcaaaaaca 229

                                       
Query: 601 atagagtcagctatgcttaagtttatgg 628
           ||||||||| ||||||||||||||||||
Sbjct: 228 atagagtcaactatgcttaagtttatgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1026
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1016
Effective search space:   627888
Effective search space used:   627888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)