Query= MSMg01no454_e12.b1 MSMg01no454_e12.b1 CHROMAT_FILE:
MSMg01no454_e12.b1 PHD_FILE: MSMg01no454_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:25 2005
(221 letters)
>mm_chr2_14554319_14554936
Length = 618
Score = 389 bits (201), Expect = e-113
Identities = 215/221 (97%), Gaps = 3/221 (1%)
Strand = Plus / Plus
Query: 1 cagagaaagaatgaacggacgcaggataggagcagaataactgatatctgttctattttg 60
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 201 cagagaaagaatgaacggacacaggataggagcag---aactgatatctgttctattttg 257
Query: 61 agaatgaatgaacatgttgatgtgttctcagtttccttggaatggcttatgaaaataccg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 258 agaatgaatgaacatgttgatgtgttctcagtttccttgggatggcttatgaaaataccg 317
Query: 121 agtcttagatatagcttagggaatgccattggaacccttctaggcttatacaaagtattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 318 agtcttagatatagcttagggaatgccattggaacccttctaggcttatacaacgtattc 377
Query: 181 tgtgctcttctctttctaagaacaaatggactgctaatgtg 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgtgctcttctctttctaagaacaaatggactgctaatgtg 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 618
Length adjustment: 9
Effective length of query: 212
Effective length of database: 609
Effective search space: 129108
Effective search space used: 129108
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_e12.g1 MSMg01no454_e12.g1 CHROMAT_FILE:
MSMg01no454_e12.g1 PHD_FILE: MSMg01no454_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:25 2005
(231 letters)
>mm_chr2_14753790_14754420
Length = 631
Score = 393 bits (203), Expect = e-114
Identities = 224/231 (96%)
Strand = Plus / Minus
Query: 1 caacttattatagaaaagaccatatttttctattgttaaacgaatatatggttataacat 60
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 383 caacttattatagaaaagaccatatttttctattgccaaatgaatatatggttataacat 324
Query: 61 ttcatggagaaaaataagttcattaagacatcctctaatttgggctggagtggtagctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttcatggagaaaaataagttcattaagacatcctctaatttgggctggagtggtagctca 264
Query: 121 gccagtagagtccatatacaatggaagctggagctagagaggaagatttatagggagtgg 180
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 263 gccagtagagtccatatacaatggaagctggagctagagaggaagaagaaaagggagtgg 204
Query: 181 cagaaagaagaggaagaaaagaacagaggagaggaggtgaggagagaagaa 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cagaaagaagaggaagaaaagaacagaggagaggaggtgaggagagaagaa 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
