XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAATT
CATAGTATTTCCTACAAGGCATGAACCAATAGGACAGCAATGACTTCTAT
AGAGTGAAGCTTGGCTTCGGTATACTGAAGGGTTGCATACAAAGTGAGGC
TAGTCACAAAAAAAAAAAGGCAAATACTTGAGGATGGCAACTGTAGGCAT
TATTTTAAAAGTCCATCTTCAAGAAGAATGCTGATTTCTAGGGTTGGAAT
TGAGAATAATGAGTGGTAGTCCACGGGAATCAAATCCAGTTATAAAGAGT
GAATTTATTCTGGTTATCTATTGCATAATGTGACTGCAATTTACAATAAT
GAATTCTATCTCAATTTGTGAATAGAAAAATCCACTCTAACAACTGATCT
TAAATATTCCTACATATGCACAGGACTGCAAATATTTTGTGAGAAAATGC
TATATTGTTTGTGTTAGGGCAGTGAGGAGAGAGTAGGTGGATGGATGGGG
GAGCTCCCTCNTAGAACCTGGAGAGATGGGATAGGAGGTCTGTGGAGTGG
AAACTGACAAGGATCATAACATTTGAAGCGTAACTACATAACTTACCCTC
TTCAACCTAAAGTACCCACTTTTCTAGTTTCCTACCCGGAATGTTTTTTT
TTTTCTTTTTTTGACCCACCTTTTTCCCCACCTTTCTACAGATTTTGGCC
CATCCTTCCCGCCTCACATTGTTTTCACCCTCTTTTTCTTCTACTCTCCC
CCCTCTTTTC

TGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTTTCGCGAAATTCCTGATCTTTCCAAAACTTTTATCATGAATGGG
TGTTGGATCTTGTCACATGCTTTTTCTGCATCTAACGAGATGATCATGTG
GTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGATTTTC
GTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGATCAGGA
TGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATT
GAGGATTTTTGTTTTTATATTCATAAGAGAAATTGGTCTGAAGTTCTCTA
TCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCA
TAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTT
GTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCAC
TAAACCCATCTGGTCCTGGGCTTTTTTTGGGTGGGAGACTATTAATAACT
GCTTCTATTTCTTTAAGTGATATGGGACTGTTTAGATGGCCAACTTGATC
CTGATTCCAACTTGGTACCTGGGATCTGTCCAGAAAATTGTTCTTTTCTT
TCAGGTTTTCCAGGTTTGTTGAGAATAACCTTTTGTATAAGGATCCTAAG
GCCGTTTGTATTTCCCCCCGACCGCGCGTTTTGCTCCTCCCTTCTATCCT
ACCTTTTTTACTN

Query= MSMg01no454_g17.b1 MSMg01no454_g17.b1 CHROMAT_FILE:
MSMg01no454_g17.b1 PHD_FILE: MSMg01no454_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:36 2005
         (444 letters)



>mm_chr2_96838851_96839693
          Length = 843

 Score =  741 bits (383), Expect = 0.0
 Identities = 417/429 (97%), Gaps = 3/429 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaaccaataggacagcaatgacttctatagagtgaagc-ttggcttcggtatactgaagg 62
           ||||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||
Sbjct: 204 gaaccaataggacagcattgacttctaaagagtgaagctttggcttctgtatactgaagg 263

                                                                       
Query: 63  gttgcatacaaagtgaggctagtcacaaaaaaaaaaaggcaaatacttgaggatggcaac 122
           ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||
Sbjct: 264 gttgcatacaaagtgaggctagtcac--acaaaaaaaggcaaatacttgaggatggcaac 321

                                                                       
Query: 123 tgtaggcattattttaaaagtccatcttcaagaagaatgctgatttctagggttggaatt 182
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 322 tgtaggcattattttaaaagtccatcttcaagaagaatgctgatttctagggttggaaat 381

                                                                       
Query: 183 gagaataatgagtggtagtccacgggaatcaaatccagttataaagagtgaatttattct 242
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 382 gagaataatgagtggtagtccacggggatcaaatccagttataaagagtgaatttattct 441

                                                                       
Query: 243 ggttatctattgcataatgtgactgcaatttacaataatgaattctatctcaatttgtga 302
           ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 442 ggagatctattgcataatgtgactgaaatttacaataatgaattctatctcaatttgtga 501

                                                                       
Query: 303 atagaaaaatccactctaacaactgatcttaaatattcctacatatgcacaggactgcaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atagaaaaatccactctaacaactgatcttaaatattcctacatatgcacaggactgcaa 561

                                                                       
Query: 363 atattttgtgagaaaatgctatattgtttgtgttagggcagtgaggagagagtaggtgga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atattttgtgagaaaatgctatattgtttgtgttagggcagtgaggagagagtaggtgga 621

                    
Query: 423 tggatgggg 431
           |||||||||
Sbjct: 622 tggatgggg 630


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 843
Length adjustment: 10
Effective length of query: 434
Effective length of database: 833
Effective search space:   361522
Effective search space used:   361522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)