Query= MSMg01no454_i04.b1 MSMg01no454_i04.b1 CHROMAT_FILE:
MSMg01no454_i04.b1 PHD_FILE: MSMg01no454_i04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:43 2005
(251 letters)
>mm_chr2_102066121_102066771
Length = 651
Score = 427 bits (221), Expect = e-124
Identities = 247/267 (92%), Gaps = 18/267 (6%)
Strand = Plus / Plus
Query: 1 acatttgaactatttctagtttaaagcaaatacaaataaagatgctctaaaaatcttatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 acatttgaactatttctagtttaaagcaaatacaaataaagatgctctaaaaatcttatg 242
Query: 61 gttttgttgtttgaagtggggcatgtgtgtgtgtgtgtgtgtgtgtgt------------ 108
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 243 gttttgttgtttgaagtggggcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 302
Query: 109 ------aagccttcacttaccttacattactacctaagcatgaaatgactagattttata 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtgtgtaagccttcacttaccttacattactacctaagcatgaaatgactagattttata 362
Query: 163 ttgaacggtagtatacatctttcccagccgactttcaaggcgacggtgccatagcacact 222
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttgaacggtagtatacatccttcccagccgactttcaaggcgacggtgccatagcacact 422
Query: 223 cttaccggaagtgtggttgtgttgcat 249
|||||||||||||||||||||||||||
Sbjct: 423 cttaccggaagtgtggttgtgttgcat 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no454_i04.g1 MSMg01no454_i04.g1 CHROMAT_FILE:
MSMg01no454_i04.g1 PHD_FILE: MSMg01no454_i04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:44 2005
(415 letters)
>mm_chr2_102219813_102220627
Length = 815
Score = 774 bits (400), Expect = 0.0
Identities = 412/416 (99%), Gaps = 1/416 (0%)
Strand = Plus / Minus
Query: 1 ccctcaaattagttacaacaattgacagtttggtatataactttataga-ttttttttta 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 482 ccctcaaattagttacaacaattgacagtttggtatataactttatagatttttttttta 423
Query: 60 gattttatttttttgcaaaaattatattatgcctatggttttatgttatctttttcatta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gattttatttttttgcaaaaattatattatgcctatggttttatgttatctttttcatta 363
Query: 120 tgcaaaatgttctagacattcatctgtgttgacaatagaatgttagttagtcttattgat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgcaaaatgttctagacattcatctgtgttgacaatagaatgttagttagtcttattgat 303
Query: 180 atgatttgggtcctagtttactttaaatgtcaacttgacatagcctagtgccatctggga 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 302 atgatttgggtcctagtttactttaaatgtcaacttgacatagcctagtgccatctcgga 243
Query: 240 ggaaagttttcattagagaattgcctggaacaagttggcatgtgaacctgtctgtggggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggaaagttttcattagagaattgcctggaacaagttggcatgtgaacctgtctgtggggg 183
Query: 300 aattgtcttaattgctaattgatgttggaaggtccagcctacttgtgggtaccaccttac 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 182 aattgtcttaattgctaattgatgttggaaggtccagcctacttgagggtaccaccttac 123
Query: 360 ctaggtaggtggtcctgtgtgagaaggctatctaagtcagcaagtagcagtcctcc 415
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 122 ctaggtaggtggtcctgtgtgagaaggctagctaagtcagcaagtagcagtcctcc 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
