Query= MSMg01no454_o19.b1 MSMg01no454_o19.b1 CHROMAT_FILE:
MSMg01no454_o19.b1 PHD_FILE: MSMg01no454_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:16 2005
(378 letters)
>mm_chr2_180351993_180352770
Length = 778
Score = 567 bits (293), Expect = e-166
Identities = 323/345 (93%), Gaps = 19/345 (5%)
Strand = Plus / Minus
Query: 53 tctctgtgtagccccagctgtcctggaactcactctgtagtccaggctggcctcaaactc 112
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tctctgtgtagtcccagctgtcctggaactcactctgtagtccaggctggcctcaaactc 719
Query: 113 agaaacctgcctgcctctgcctcccaagtgctgggattaaaggcgtgtgccaccacgccc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 agaaacctgcctgcctctgcctcccaagtgctgggattaaaggcgtgtgccaccacgccc 659
Query: 173 ggctgccactgcctggtcctatacatcttttaaaatggtagtcactcacatgataccaga 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ggctgccactgcctggtcctatacatcttttaaaatggtagtcactcacatgataccaga 599
Query: 233 t-------------------ggccatactctggagtattggcagagaaaacagtcattgg 273
| ||||||||||||||| | ||||||||||||||||||||||
Sbjct: 598 tggcacaggctgcctacaaaggccatactctggaggagtggcagagaaaacagtcattgg 539
Query: 274 aaagttgatttgggacagacactgcactgagacaagatgaattcttcatgttttctctct 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aaagttgatttgggacagacactgcactgagacaagatgaattcttcatgttttctctct 479
Query: 334 agtgttgaaattcctcaatttccaaggattttaagaacaggtgga 378
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agtgttgaaattcctcaatttccaaggattttaagaacaggtgga 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no454_o19.g1 MSMg01no454_o19.g1 CHROMAT_FILE:
MSMg01no454_o19.g1 PHD_FILE: MSMg01no454_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:16 2005
(387 letters)
>mm_chr2_180179218_180180004
Length = 787
Score = 687 bits (355), Expect = 0.0
Identities = 379/387 (97%)
Strand = Plus / Plus
Query: 1 ccccactcagtgacttctggtgactgggatcacatgacaatggttttcttgtgactggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccactcagtgacttctggtgactgggatcacatgacaatggttttcttgtgactggcc 260
Query: 61 cctcaggggccagggagatggcttctgggcaaacttaatagcctgagtctgatccctgga 120
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcaggggccagtgagatggctcctgggcaaacttaatagcctgagtctgatccctgga 320
Query: 121 tcccacagcagaaggagaaaagaaaatctgacctctggcttccatatacacagcacagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccacagcagaaggagaaaagaaaatctgacctctggcttccatatacacagcacagca 380
Query: 181 tacatgctatgtcacacacacaataataatgacaaatattaaaaaattgaaaatagaatc 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 tacatgctatgtcacacacacaataataatgacgaatattaaaaaattgaaaatagaatc 440
Query: 241 ctcttttttcatctacattctggtttggtcagaatccttcctctgtgaggctgagtaacg 300
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcaagtttcatccacattctggtttggtcagaatccttcctctgtgaggctgagtaaca 500
Query: 301 gcctgatacatgagcagagcagcttattcatctatgtatccattgagaaatacttgtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctgatacatgagcagagcagcttattcatctatgtatccattgagaaatacttgtctc 560
Query: 361 ctcatggttgctataaatagagttgtg 387
|||||||||||||||||||||||||||
Sbjct: 561 ctcatggttgctataaatagagttgtg 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
