Query= MSMg01no455_p19.b1 MSMg01no455_p19.b1 CHROMAT_FILE:
MSMg01no455_p19.b1 PHD_FILE: MSMg01no455_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:38 2005
(571 letters)
>mm_chr2_99075681_99076651
Length = 971
Score = 1069 bits (553), Expect = 0.0
Identities = 565/569 (99%)
Strand = Plus / Plus
Query: 1 tgactatgtctcaaaaaaataaggctattgctcctgagaactgcactagagtttttccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgactatgtctcaaaaaaataaggctattgctcctgagaactgcactagagtttttccta 260
Query: 61 catcctctacatgcatgctcacatccatgaatgtatatccatacactcagacaattacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcctctacatgcatgctcacatccatgaatgtatatccatacactcagacaattacaa 320
Query: 121 acatacacacaaacacacacactatatttttaaatccatcattttctaaatttagtaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatacacacaaacacacacactatatttttaaatccatcattttctaaatttagtaaat 380
Query: 181 taatagaaatgcatatcattaaaacggtgtgtcacaaacattaattttgctactctgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatagaaatgcatatcattaaaacggtgtgtcacaaacattaattttgctactctgatc 440
Query: 241 agatatttattctatcatatatgccttaggttaaaatcctctgaatcttatagtttttat 300
||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agacatttaggcaatcatatatgccttaggttaaaatcctctgaatcttatagtttttat 500
Query: 301 aatctttttgtaagaaaaatagtttcaaaatcatggaaactattctaccatttggcgatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatctttttgtaagaaaaatagtttcaaaatcatggaaactattctaccatttggcgatc 560
Query: 361 atgatataaaacaaactattttatatattatcttatattcaaattttaatttcaatggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgatataaaacaaactattttatatattatcttatattcaaattttaatttcaatggca 620
Query: 421 ggttgacttgccatcaagagatagtaaaaatagcattctaattaaaaaagaattgtagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttgacttgccatcaagagatagtaaaaatagcattctaattaaaaaagaattgtagct 680
Query: 481 tattgttttgtcatagctccttgttgaaatccccttgctgaaattaggaaaaagaaacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tattgttttgtcatagctccttgttgaaatccccttgctgaaattaggaaaaagaaacaa 740
Query: 541 acaacataaaatgccaattctggagacac 569
|||||||||||||||||||||||||||||
Sbjct: 741 acaacataaaatgccaattctggagacac 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_p19.g1 MSMg01no455_p19.g1 CHROMAT_FILE:
MSMg01no455_p19.g1 PHD_FILE: MSMg01no455_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:38 2005
(487 letters)
>mm_chr2_99244125_99245011
Length = 887
Score = 621 bits (321), Expect = 0.0
Identities = 350/361 (96%), Gaps = 5/361 (1%)
Strand = Plus / Minus
Query: 124 aattggtttaact-aaaaaaagcctttgacctatagcataatgctaaatatttc--agtg 180
||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |
Sbjct: 887 aattggtttaactaaaaaaaagcctttgacctgtagcataatgctaaatatttccaa--g 830
Query: 181 gggcacctaggcagagaggatctctgggaaagagtgaggatggggaggcagcgatttgtc 240
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 829 ggacacctaggcagagaggatctctgggaaagagtaaggatggggaggcagcgatttgtc 770
Query: 241 aaaggacttgtgtaagaagttggacttgttgaagaaggaaactgaggagacataactggt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 769 aaaggacttgtgtaagaagttggacatgttgaagaaggaaactgaggagacataactggt 710
Query: 301 aatgtggcagaacttagattagtataaactagataagtgagttgcaagctatttggggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aatgtggcagaacttagattagtataaactagataagtgagttgcaagctatttggggag 650
Query: 361 cagactccaagacaataaataattaacataaggcaatgctgttacacattttgataaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 cagactccaagacaataaataattaacataaggcaatgctgttacacattttgataaact 590
Query: 421 aggtttcctaaaggcaactaggttactggcttggcttctcaagaatgtctaatgtgttga 480
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 589 aggttacctaaaggcaactaggttactggcttggcttctcaggaatgtctaatgtgttga 530
Query: 481 a 481
|
Sbjct: 529 a 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
