Query= MSMg01no457_b12.b1 MSMg01no457_b12.b1 CHROMAT_FILE:
MSMg01no457_b12.b1 PHD_FILE: MSMg01no457_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:09 2005
(477 letters)
>mm_chr2_45587493_45588368
Length = 876
Score = 886 bits (458), Expect = 0.0
Identities = 470/474 (99%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 4 taagtaaatcaataaccatttgagatcattgttatattttcccataataaaatattttct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 taagtaaatcaataaccatttgagatcattgttatattttcccataataaaatattttct 617
Query: 64 gttagaaaatacaaattaattgtaccaatggttatggtaatcatttatataatataagta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gttagaaaatacaaattaattgtaccaatggttatggtaatcatttatataatataagta 557
Query: 124 attggaggataatattctttaattctattctataaaaaaatacctagtctaacaaagaaa 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 556 attggaggataatattctttaattctattctat-aaaaaatacctagtctaacaaagaaa 498
Query: 184 tgtaaagcattacaatagtaaaggcactaagttgattaaattactattatttcaaagaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgtaaagcattacaatagtaaaggcactaagttgattaaattactattatttcaaagaac 438
Query: 244 ctagtgtagtttagttacttgtagtcactggaggagacattcattccactctcagtcctg 303
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctagtgtagcatagttacttgtagtcactggaggagacattcattccactctcagtcctg 378
Query: 304 tgtccagtgtttttcagactagaaggtaaagagttgcaccacacctctgaagtattctga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgtccagtgtttttcagactagaaggtaaagagttgcaccacacctctgaagtattctga 318
Query: 364 gggaactttgaactacatagatgaggatagcctttcccctaggcttttatacaattgaaa 423
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gggaactttgaactacacagatgaggatagcctttcccctaggcttttatacaattgaaa 258
Query: 424 atttcattaacatgttactggtgataataatttgaattattggaacttttgtac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atttcattaacatgttactggtgataataatttgaattattggaacttttgtac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space: 404422
Effective search space used: 404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_b12.g1 MSMg01no457_b12.g1 CHROMAT_FILE:
MSMg01no457_b12.g1 PHD_FILE: MSMg01no457_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:09 2005
(426 letters)
>mm_chr2_45441080_45441906
Length = 827
Score = 748 bits (387), Expect = 0.0
Identities = 417/427 (97%), Gaps = 1/427 (0%)
Strand = Plus / Plus
Query: 1 ttcccttttgtcactctgtgattgcctggaagtcatagtgaatattgcacacggcttctt 60
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 201 ttcccttttgtcactctgtgattgcctggaagtcatagtgaatgttgtacacggcttctt 260
Query: 61 taggaaggtaaggtaggagtttcttaatgtcacagagcctggccaagtgctgagagacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggaaggtaaggtaggagtttcttaatgtcacagagcctggccaagtgctgagagacag 320
Query: 121 cagatctgctactcttcccaaagcttgcaactttcttattctttaccatttagcctgagt 180
||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 cagatctgctattcgtcccaaagcttacaactttcttattctttaccatttagcctgagt 380
Query: 181 caattttgtttagctcaagagcgaaaagtatttattgaat-ataacaggattcacattat 239
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 caattttgtttagctcaaaagcgaaaagtatttattgaattataacaggattcacattat 440
Query: 240 atataataattctaataattcctcatacatgtatttaggagaacatatttccaataaata 299
||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 atataataagtcaaataattcctcatacatgtatttaggaggacatatttccaataaata 500
Query: 300 gcgacataaaaacgttcttgcctcaaatttctgttgctgtatgactttcttcttagtcca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcgacataaaaacgttcttgcctcaaatttctgttgctgtatgactttcttcttagtcca 560
Query: 360 ctgaggcaacactttcctttttcaatttctctattaactttaattaggctcgtgagtttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgaggcaacactttcctttttcaatttctctattaactttaattaggctcgtgagtttg 620
Query: 420 ctggcca 426
|||||||
Sbjct: 621 ctggcca 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 827
Length adjustment: 9
Effective length of query: 417
Effective length of database: 818
Effective search space: 341106
Effective search space used: 341106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
