Query= MSMg01no457_c24.b1 MSMg01no457_c24.b1 CHROMAT_FILE:
MSMg01no457_c24.b1 PHD_FILE: MSMg01no457_c24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:18 2005
(442 letters)
>mm_chr2_27933958_27934801
Length = 844
Score = 785 bits (406), Expect = 0.0
Identities = 431/440 (97%), Gaps = 2/440 (0%)
Strand = Plus / Plus
Query: 5 gaattctcccagattcctgtgctttctaatgcagtagcctgaacctggatgtgcaaggtt 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcccagagggctgtgctttctaatgcagtagcctgaacctggatgtgcaaggtt 264
Query: 65 ttagatttttttttt--aattggaagcacagaagcagacacaataaggtgtcctggtagt 122
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttagatttttttttttaaattggaagcacagaagcagacacaataaggtgtcctggtagt 324
Query: 123 gggtaagtggcaaaaggctatgtgattttcagtgggaggagaagggactaagagagcttg 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtaagtggcaaaaggctatgtgattttcagtgggaggagaagggactaagagagcttg 384
Query: 183 ctttctctgtggcttgtagaggcaaaggggacttttgtagaacccagaagcaagtgttct 242
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 ctttctctgtggcttgtagaggcaaaggggacttttgtagaacccagaggcaagtgttct 444
Query: 243 ggatgaattaacagctagagatgaaaaacaatgtccccaagacattggctgggtcctgag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggatgaattaacagctagagatgaaaaacaatgtccccaagacattggctgggtcctgag 504
Query: 303 aagtcatatcccacagtttagaggaggcccttatcccctgaccttcacccggcagaaggg 362
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 505 aagtcatatcccacagtttagaggaggcccttatcccctgactttcacccagcagaaggg 564
Query: 363 cacagctgtgatctcactccctggggtgactttgctgagcattgcatactctaaccatgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacagctgtgatctcactccctggggtgactttgctgagcattgcatactctaaccatgg 624
Query: 423 gggactcttgccccatgacc 442
||||||||||||||||||||
Sbjct: 625 gggactcttgccccatgacc 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 844
Length adjustment: 10
Effective length of query: 432
Effective length of database: 834
Effective search space: 360288
Effective search space used: 360288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_c24.g1 MSMg01no457_c24.g1 CHROMAT_FILE:
MSMg01no457_c24.g1 PHD_FILE: MSMg01no457_c24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:18 2005
(287 letters)
>mm_chr2_28101217_28101903
Length = 687
Score = 485 bits (251), Expect = e-141
Identities = 278/287 (96%)
Strand = Plus / Minus
Query: 1 tttcacggaaagtctgtgactataacctggcactggagagctgaagggagagcagcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttcacggaaagtctgtgactataacctggcactggagagctgaagggagagcagcctgg 428
Query: 61 gcaaaggcatgtcacttagggctgggcatggacggcatgaggagacctgggtgagaggga 120
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 427 gcaaaggcatgtcacttagggctgggcatggatggcacgaggagacctgggtgagaggga 368
Query: 121 tatagggtggtggcagacgggtctgtgacccatgtgctctgacacccttctcttccttga 180
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 367 tatagggtggtggcagactggtctgtcacccatgtgctctgacacccttctcttccttga 308
Query: 181 acacccatccgtagggacgagcttcatgatggcttttgcttctgactgccgtgttcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 acacccatccgtagggacgagcttcatgatggcttttgcttctgactgccgtgttcacat 248
Query: 241 taagtctgatattgtttctcccagaagggagtgtgaagccttctgtt 287
||||||||| | || ||||||||||||||||||||||||||||||
Sbjct: 247 taagtctgagaatgaggctcccagaagggagtgtgaagccttctgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
