Query= MSMg01no457_i07.b1 MSMg01no457_i07.b1 CHROMAT_FILE:
MSMg01no457_i07.b1 PHD_FILE: MSMg01no457_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:45 2005
(451 letters)
>mm_chr2_173846563_173847413
Length = 851
Score = 781 bits (404), Expect = 0.0
Identities = 440/456 (96%), Gaps = 10/456 (2%)
Strand = Plus / Plus
Query: 1 ccagaggcagcttcagagatagcttgtcccaatctttggtgtccagaatggctcaaactg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ccagaggcagcttcagagatagcttgtcccaatctttggtgtccagaatgactcaaactg 260
Query: 61 ccccatctttgcccttggaggcaaagcagctgcagtccatgactaaaggttgttcccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccccatctttgcccttggaggcaaagcagctgcagtccatgactaaaggttgttcccaaa 320
Query: 121 tcacatgtcattaggtgtggggtcagagcctcttggcctcccagcctccaggcctctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacatgtcattaggtgtggggtcagagcctcttggcctcccagcctccaggcctctg-- 378
Query: 181 ttg----tctcagcctctttgcctccctgcctggcagcagagccttgctacagctctctg 236
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 --gcaagtctcagcctccttgcctccctgcctggcagcagagccttgctacagctctctg 436
Query: 237 ttccctgtttaat-gtttcaggccagatattgatctccatacccagaatcacacaagcct 295
||||||||| || | || ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 437 ttccctgttgaacagcttaaggccagatattgatctccatacccagaa-cacacaagcct 495
Query: 296 gtcttactcaggggctcagacccctagcaggtggccagataaagtctcatgtagcagagc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtcttactcaggggctcagacccctagcaggtggccagataaagtctcatgtagcagagc 555
Query: 356 tgagctcctggtgtcctaccccctcatacacccccgccacccttcgcaactgaccaaact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgagctcctggtgtcctaccccctcatacacccccgccacccttcgcaactgaccaaact 615
Query: 416 acagctaaaagatctttcattcccccatgttaattt 451
||||||||||||||||||||||||||||||||||||
Sbjct: 616 acagctaaaagatctttcattcccccatgttaattt 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_i07.g1 MSMg01no457_i07.g1 CHROMAT_FILE:
MSMg01no457_i07.g1 PHD_FILE: MSMg01no457_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:45 2005
(247 letters)
>mm_chr2_174011926_174012571
Length = 646
Score = 429 bits (222), Expect = e-125
Identities = 240/248 (96%), Gaps = 5/248 (2%)
Strand = Plus / Minus
Query: 1 tcagctttttctgggtttcccaggaagatgaaccttaattatttgtctctacctaacctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagctttttctgggtttcccaggaagatgaaccttaattatttgtctctacctaacctg 386
Query: 61 gtactaggggagggatatctcttttgatctttttgcctttcagaccaagggtgatttctc 120
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 385 gtactaggggagggatatctcttctgatctttctgcctttcagaccaagggtgatttctc 326
Query: 121 tagatggatctatggccattctttctcagccttgctgagtgaagaccattgatgcagctg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 tagatggatctatggccattctttctcggccttgctgagtgaagaccattgatgcagctg 266
Query: 181 --tttttgggactgcagaattgcacagtctggcagagactctgacctgagcagggactct 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gc---ttgggactgcagaattgcacagtctggcagagactctgacctgagcagggactct 209
Query: 239 ggacacta 246
||||||||
Sbjct: 208 ggacacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 646
Length adjustment: 9
Effective length of query: 238
Effective length of database: 637
Effective search space: 151606
Effective search space used: 151606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
