Query= MSMg01no457_p15.b1 MSMg01no457_p15.b1 CHROMAT_FILE:
MSMg01no457_p15.b1 PHD_FILE: MSMg01no457_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:25 2005
(433 letters)
>mm_chr2_147429876_147430708
Length = 833
Score = 801 bits (414), Expect = 0.0
Identities = 429/434 (98%), Gaps = 1/434 (0%)
Strand = Plus / Minus
Query: 1 aatataag-aaaaaaaactgaaacagttctttcaaaataacattttgatgagttgagtgt 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 aatataagaaaaaaaaactgaaacagttctttcaaaataacattttgatgagttgagtgt 767
Query: 60 aaatgaactagaaacacacggattaaatttccctggaaatacacatgggtttcaaaatta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aaatgaactagaaacacacggattaaatttccctggaaatacacatgggtttcaaaatta 707
Query: 120 aggggaattaacttctccaaatgttttcaatttgcctaacctcagaagtttgatgcatgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aggggaattaacttctccaaatgttttcaatttgcctaacctcagaagtttgatgcatgg 647
Query: 180 tttgagacagttggcttcgtgccaattttgtgcatccttgccagggttctacctgggaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttgagacagttggcttcgtgccaattttgtgcatccttgccagggttctacctgggaaa 587
Query: 240 acattttattttcatctatccttagtcctgacagcttaacaatatgactaatcagatagg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 acattttattttcatctatccttagtcctgacagcttaacaatatgactaatcagatagg 527
Query: 300 tagggccctaaattgtgccataaatattatttgaaatgagctccttgcctatgcattggc 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 526 tagggccctaaattgtgccataaatattatctgaaatgagctccttgcctatgcattggc 467
Query: 360 tctttgattttatacagtactgggtgttcggaaagtccaaagcaaatgatattgtcagga 419
||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 466 tctttgactttatacagtactgggtgtttggaaagtccaaagcaaatgatgttgtcagga 407
Query: 420 aacttctgaggatg 433
||||||||||||||
Sbjct: 406 aacttctgaggatg 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_p15.g1 MSMg01no457_p15.g1 CHROMAT_FILE:
MSMg01no457_p15.g1 PHD_FILE: MSMg01no457_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:25 2005
(347 letters)
>mm_chr2_147252358_147253104
Length = 747
Score = 625 bits (323), Expect = 0.0
Identities = 341/353 (96%), Gaps = 11/353 (3%)
Strand = Plus / Plus
Query: 1 aactattctcgtctcccccaccctcgtaagacttttatgtaaacgttttaattctgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactattctcgtctcccccaccctcgtaagacttttatgtaaacgttttaattctgtttt 260
Query: 61 acaggtgtgcatggaacatcaggaaaaccttcacttgcacaaatgggccccgatgcgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaggtgtgcatggaacatcaggaaaaccttcacttgcacaaatgggccccgatgcgctc 320
Query: 121 caagcgtttgatgttctggagcagggaccctttccctttcctccttcacttcctgtgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagcgtttgatgttctggagcagggaccctttccctttcctccttcacttcctgtgtga 380
Query: 181 tgattattttcagactagccaattgaattaaagtgtgagaccaagccgtagccaatgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgattattttcagactagccaattgaattaaagtgtgagaccaagccgtagccaatgagg 440
Query: 241 aaaagatttttctc------cacctggggtggaatataaagcaagtgagtttcctttctc 294
|||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaga-----cacagccaccacctggggtggaatataaagcaagtgagtttcctttctc 495
Query: 295 tgtgttgtctcttttacctggaacttacttctaacagggggtaaggggggagg 347
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgtgttgtctcttttacctggaacttacttctaacagggggtaaggggggagg 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
