Query= MSMg01no458_p12.b1 MSMg01no458_p12.b1 CHROMAT_FILE:
MSMg01no458_p12.b1 PHD_FILE: MSMg01no458_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:42 2005
(244 letters)
>mm_chr2_72272374_72273017
Length = 644
Score = 402 bits (208), Expect = e-117
Identities = 234/247 (94%), Gaps = 10/247 (4%)
Strand = Plus / Plus
Query: 1 cctgggagactatggnttggtttagtgtttccttactttgt-gtggacacactatctttt 59
||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||
Sbjct: 201 cctgggagactatggtttggtttagtgtttccttactttgtggtgg-cacactatgtttt 259
Query: 60 gatgtctgggggactagaaaggaccacaatgtccttattggtacaagcctcttggcatga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gatgtctgggggactagaaaggaccacaatgtccttattggtacaagcctcttggcatga 319
Query: 120 tagcctgacagactggaaagctgagtggttatcaaatcctctacactagtcactgctttt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tagcctgacagactggaaagctgagtggttatcaaatcctctacactagtcactgct--- 376
Query: 180 tc----taaaggggcctctcatattatcatggctcttaatattgagaaagctttggacta 235
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 377 -caacctaaaggggcctctcatattatcatggctcttaatattgagaaagctttgggcta 435
Query: 236 ctgcttc 242
|||||||
Sbjct: 436 ctgcttc 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no458_p12.g1 MSMg01no458_p12.g1 CHROMAT_FILE:
MSMg01no458_p12.g1 PHD_FILE: MSMg01no458_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:42 2005
(333 letters)
>mm_chr2_72443841_72444571
Length = 731
Score = 551 bits (285), Expect = e-161
Identities = 319/331 (96%), Gaps = 2/331 (0%)
Strand = Plus / Minus
Query: 3 ctttcatcaaaaacagtggttaagtacaggatgcaagatctgggagcgcatgatccccta 62
|||||||| ||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 531 ctttcatc--aaacagtggctaagtacaggaggcaagatctgggagtgcatgatccccta 474
Query: 63 taaaacataaaagaaggtgagacaaggttagctctccaacccacagcacactgaccaagc 122
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 473 tgaaacataaaagaaggtgagacaaggttagctctccaacccatagcacactgaccaagc 414
Query: 123 aacagaatgcagcaggattttattagcagggccctcgacagtttaagttgttgtgtgaaa 182
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 413 aacagaatgcagcaggattttattagtagggcccttgacagtttaagttgttgtgtgaaa 354
Query: 183 ctaattgcttaagcttcttggagtatctatgcattaaattgtgagtcaataaaatgatct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctaattgcttaagcttcttggagtatctatgcattaaattgtgagtcaataaaatgatct 294
Query: 243 gtttatgagctgtttgtgtttagacaccatcccagtaaccaagtgttggagaacagatgg 302
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 293 gtttatgagctgtttgtgtttagacaccatcccggtaaacaagtgttggagaacagatgg 234
Query: 303 ctggtactgtgggctacgagtttcctaagcc 333
||||||||||| |||||||||||||||||||
Sbjct: 233 ctggtactgtgagctacgagtttcctaagcc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 731
Length adjustment: 9
Effective length of query: 324
Effective length of database: 722
Effective search space: 233928
Effective search space used: 233928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
