Query= MSMg01no459_d05.b1 MSMg01no459_d05.b1 CHROMAT_FILE:
MSMg01no459_d05.b1 PHD_FILE: MSMg01no459_d05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:02 2005
(354 letters)
>mm_chr2_73579992_73580745
Length = 754
Score = 638 bits (330), Expect = 0.0
Identities = 348/354 (98%)
Strand = Plus / Minus
Query: 1 tgtgttcatgtaaaagatctcttgtcctgtttatgaatcatatattgctttatatggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgtgttcatgtaaaagatctcttgtcctgtttatgaatcatatattgctttatatggttt 495
Query: 61 taactgatacctatattcgcattatgttttgtgcttgattttatgcatatattttatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 taactgatacctatattcgcattatgttttgtgcttgattttatgcatatattttatgtg 435
Query: 121 ttgtatgtttattttatacacacacatgtatttgttacattcacttttgtcaggcttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttgtatgtttattttatacacacacatgtatttgttacattcacttttgtcaggcttttt 375
Query: 181 gctgtttgtcatgcaggaaatgctttggagctgttttttgcagagtgacaggaaggagct 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 374 gctgtttgtcatgcaggaaatgctttggagctgtttgttgcagagtgacaggaaggagct 315
Query: 241 ctcctctgtcttacttttgactctggcatcagaagttctgaggactgtatggaaatcttt 300
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctcctctgtcatacgtttgactctggcatcagaagttctgaggactgtatggaaatcttt 255
Query: 301 ctactgtcatctgtgtgcatcttcctgataatttctttaatatcacctatctca 354
||||||||||||||||| |||||||||| |||||||||||||||| ||||||||
Sbjct: 254 ctactgtcatctgtgtgtatcttcctgaaaatttctttaatatcagctatctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_d05.g1 MSMg01no459_d05.g1 CHROMAT_FILE:
MSMg01no459_d05.g1 PHD_FILE: MSMg01no459_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:02 2005
(241 letters)
>mm_chr2_73387376_73388023
Length = 648
Score = 348 bits (180), Expect = e-100
Identities = 229/248 (92%), Gaps = 9/248 (3%)
Strand = Plus / Plus
Query: 1 aatgtgtgctctgggccagccagtgggctactttaccaatagatggtaaagaactagaga 60
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 aatgtgtgctctgggtcagccagtgggctactttaccaatagacggtaaagaactagaga 260
Query: 61 tacagccctaaatggaatgcatatggagtgc-ccccccccc-----gccctcact-ccta 113
|||| |||||||||||| ||||||||||||| ||||||||| |||| || | ||||
Sbjct: 261 tacaaccctaaatggaacgcatatggagtgctcccccccccccaccgccccca-tgccta 319
Query: 114 aggatcagagatcgtaggtgtgtgtgggaaagagagtaggggcaataggtggtaaatgac 173
|||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 320 aggatcagagatcgtaggtgtgtgtgagaaagagagtaggggcaataggtagcaaatgac 379
Query: 174 tacagggaaattgtctactgaatacagcagg-cagctgcatgtgcgaacttacagtggct 232
|||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||
Sbjct: 380 tacagggaaattgtctactgaacacagcagggcagctgcatgtgtgaacttacagtggct 439
Query: 233 gatgacag 240
||||||||
Sbjct: 440 gatgacag 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 648
Length adjustment: 9
Effective length of query: 232
Effective length of database: 639
Effective search space: 148248
Effective search space used: 148248
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
