Query= MSMg01no459_i19.b1 MSMg01no459_i19.b1 CHROMAT_FILE:
MSMg01no459_i19.b1 PHD_FILE: MSMg01no459_i19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:30 2005
(369 letters)
>mm_chr2_129398291_129399058
Length = 768
Score = 675 bits (349), Expect = 0.0
Identities = 361/365 (98%), Gaps = 1/365 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctattctcgagactcacaggagttcactcctaagtgtctttggcacagatgc 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggaattctctatcct-gagactcacaggagttcactcctaagtgtctttggcacagatgc 509
Query: 64 tgccacaactcacggagcgttctcatgaatgctggacatctgcccggtggccttcccatg 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tgccacaacgcacggagcgttctcatgaatgctggacatctgcccggtggccttcccatg 449
Query: 124 tggcatgggtgccggggccatacctatggatactctgcacccactccaaggacacatctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tggcatgggtgccggggccatacctatggatactctgcacccactccaaggacacatctt 389
Query: 184 gtatgggctcatttttccgtgtcacaactacgtgaggcagatggacagcaaaacttgggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtatgggctcatttttccgtgtcacaactacgtgaggcagatggacagcaaaacttgggt 329
Query: 244 ggtaatgagtgccccaactcctctcagtttctgttctcagctgtgagtggacttgggttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggtaatgagtgccccaactcctctcagtttctgttctcagctgtgagtggacttgggttg 269
Query: 304 ggggtggggtagctggttgaaaaacaaccaacgtgatcttaaatttttctctttcttcgt 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 268 ggggtggggtagctggttgaaaaacaaccaacgtgatcttagatttttctctttcttcgt 209
Query: 364 tttaa 368
|||||
Sbjct: 208 tttaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 768
Length adjustment: 9
Effective length of query: 360
Effective length of database: 759
Effective search space: 273240
Effective search space used: 273240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_i19.g1 MSMg01no459_i19.g1 CHROMAT_FILE:
MSMg01no459_i19.g1 PHD_FILE: MSMg01no459_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:31 2005
(384 letters)
>mm_chr2_129210055_129210839
Length = 785
Score = 708 bits (366), Expect = 0.0
Identities = 380/385 (98%), Gaps = 1/385 (0%)
Strand = Plus / Plus
Query: 1 cagtgtcaccctgggctgcaaacctcagcagaatttgcttagctactgggagttggtgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgtcaccctgggctgcaaacctcagcagaatttgcttagctactgggagttggtgcc 260
Query: 61 tctc-tgtcatcttaccgatggcagtgcaggcaatggaacacatggggatggaatggaga 119
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcctgtcatcttaccgatggcagtgcaggcaatggaacacatggggatggaatggaga 320
Query: 120 agagtaagccctcggtgttctttctgaacccatgtttctcttactggcttactctgactg 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtaaaccctcggtgttctttctgaacccatgtttctcttactggcttactctgactg 380
Query: 180 cttgccagagcacttagctcttgtactgacaaacatgccctgacagggttttaggaaatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgccagagcacttagctcttgtactgacaaacatgccctgacagggttttaggaaatt 440
Query: 240 tcccgagtcttgccctagggctgcgaaagctagttttagtaaagaatgaggtttagttta 299
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccgagtcttgccctaggactgcgaaagctagttttagtaaagaatgaggtttagttta 500
Query: 300 gcaagaactgatcagtcctgatattttgtctggntcttccttttgcctcatttcccagga 359
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 501 gcaagaactgatcagtcctgataatttgtctggttcttccttttgcctcatttcccagga 560
Query: 360 actgtctgctcacatgacttgtctt 384
|||||||||||||||||||||||||
Sbjct: 561 actgtctgctcacatgacttgtctt 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 785
Length adjustment: 9
Effective length of query: 375
Effective length of database: 776
Effective search space: 291000
Effective search space used: 291000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
