Query= MSMg01no459_o10.b1 MSMg01no459_o10.b1 CHROMAT_FILE:
MSMg01no459_o10.b1 PHD_FILE: MSMg01no459_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:59 2005
(409 letters)
>mm_chr2_132639871_132640679
Length = 809
Score = 640 bits (331), Expect = 0.0
Identities = 379/399 (94%), Gaps = 8/399 (2%)
Strand = Plus / Minus
Query: 1 gccaaatgctttgtatttcctggagttggagttacagccaattgggaaccacacaacttg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 729 gccaaatgctttgtatttcctggagttggcgttacagccaattgggaaccacacaacttg 670
Query: 61 ggtgctgggaaccaaagtcagatcctgtggaagagcagtaagtgctctcgagtgctcggt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 669 ggtgctgggaaccaaagtcagatcctgtggaagagcagtaagtgctctcgagtgctgggt 610
Query: 121 catttctccagctccctaaaaaatcagctgtaagctctttttactatccctgttcttagg 180
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 609 catttctccagctccctaaagagtcagctgtaagctctttttactatccctgttcttagg 550
Query: 181 aagccacgatcctaattttttgttttatttagaaaatgacccactgaacccagctgcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aagccacgatcctaattttttgttttatttagaaaatgacccactgaacccagctgcatc 490
Query: 241 cca----tgttttattccctatcaccaaagagatcatggctctctgccactcttaatcct 296
||| | | ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 489 ccaagccgg----actccctatcaccaaagagatcatggctctctgccactcttaatcgt 434
Query: 297 tcccaggaaacaggcagcttccttattcatcagatcgcgtcccacactttccggcctgtc 356
||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||
Sbjct: 433 tcccaggaaacaggcagcttcattatttatcagatcgcctcccacactttccggcctgtc 374
Query: 357 agtttgggtacttgccccccaggcccccaccacacacac 395
||||||| | |||||||||||||||||||||||||||||
Sbjct: 373 agtttggatgcttgccccccaggcccccaccacacacac 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_o10.g1 MSMg01no459_o10.g1 CHROMAT_FILE:
MSMg01no459_o10.g1 PHD_FILE: MSMg01no459_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:59 2005
(462 letters)
>mm_chr2_132485087_132485948
Length = 862
Score = 723 bits (374), Expect = 0.0
Identities = 423/444 (95%), Gaps = 10/444 (2%)
Strand = Plus / Plus
Query: 1 atatgtgggaatcatttgggacccggatgaaggcatctttccccacagaagatttctgtt 60
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 atatgtgggaatcatttgagacccggatgagggcatctttccccacagaagatttctgtt 260
Query: 61 cccctccactgtcatctgaaggtaacacaaaccactttagttctagtccagattaaacct 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||
Sbjct: 261 cccctccactgtcatctgaaggtgacacaaaccactttagttctagtccagatcaaatct 320
Query: 121 ttagcttccttagactgtgtggctacacatgcctgtaattccagcacttgtggggccaaa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ttagcttccttagactgtgtggctacacatgcctgtaattccagcatttgtggggccaaa 380
Query: 181 acaggattataggaaataactaggggaacataatgagtccttatataaatgttaaattat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaggattataggaaataactaggggaacataatgagtccttatataaatgttaaatta- 439
Query: 241 tttaaa----aaaagcatttccttagattcttccagtgatgtgggccagctttaatcctt 296
||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 440 ---aaagaaaaaaagcatttccttagattcttccagtgatgtgggccagcttaaatcctt 496
Query: 297 caggaacttggcttcattctctgttcactctgaaaaggtagctcggtcccagccaaacgg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 caggaacttggcttcattctctgttcactctgaaaaggtagctcggtcccagccaaacgg 556
Query: 357 aagatcagagtcacctcccagggcaggctttgctaagtgacattttctttttttcttcct 416
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 557 aagatcagagtcacctcccagggcaggctttgctaagtgacattttctttctttctttct 616
Query: 417 ctctttctctctttct--ctttct 438
||||||| ||||||| ||||||
Sbjct: 617 ttctttctttctttctttctttct 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
