Query= MSMg01no460_c06.b1 MSMg01no460_c06.b1 CHROMAT_FILE:
MSMg01no460_c06.b1 PHD_FILE: MSMg01no460_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:18 2005
(540 letters)
>mm_chr2_132527044_132527986
Length = 943
Score = 965 bits (499), Expect = 0.0
Identities = 519/527 (98%), Gaps = 5/527 (0%)
Strand = Plus / Plus
Query: 18 aggctctcttgggttgagggtggactggctacaattactccccagtttttatacagtaat 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aggctctcttgggttgagggtggactggctacaattactccccagtttttatacagtaat 277
Query: 78 agcaagtgccgagtttgcttctgctgccctcttgtg---gctgctgcccacagatttctg 134
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 278 agcaagtgccgagtttgcttctgctgccctcttgtggctgctgctgcccacagatttctg 337
Query: 135 agggcgggtcgggg-gtgaaatgtgagttaaaccttttgtcattcattctctgctttgat 193
||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agggccggt-ggggcgtgaaatgtgagttaaaccttttgtcattcattctctgctttgat 396
Query: 194 taagatgacaaccgcaccctcccacaccccaccccctcacacacaccccacccctgtcat 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 397 taagatgacaaccgcaccctcccacaccccaccccctcacacacaccccacccctgccat 456
Query: 254 cacccagacagacacaagcaccatttgggtggaactcaagactcggggcacatgtgaagc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cacccagacagacacaagcaccatttgggtggaactcaagactcggggcacatgtgaagc 516
Query: 314 aagagctcagccttgagctacacactgcacacccagcccctctctttatagaagctgtct 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aagagctcagccttgagctacacactgcacacccagcccctctctttatagaagctgtct 576
Query: 374 actggggtagaattaaacatttttagagactccttttttgaaatgaggtcttaggctgga 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 actggggtagaattaaacatttttagagactccttttttgaaatgaggtcttaggctgga 636
Query: 434 acttgagcagctaatttgtcactgtccccaatgtcagctgtgttcactatgcatgtgcga 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 acttgagcagctaatttgtcactgtccccaatgtcagctgtgttcactatgcatgtgcga 696
Query: 494 tgtggtctaagagcatgttcatggcgttgtccatgcatttacctata 540
||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 697 tgtggtctaagagcatgttcatggcattgtccatgcatttacctata 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 943
Length adjustment: 10
Effective length of query: 530
Effective length of database: 933
Effective search space: 494490
Effective search space used: 494490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_c06.g1 MSMg01no460_c06.g1 CHROMAT_FILE:
MSMg01no460_c06.g1 PHD_FILE: MSMg01no460_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:18 2005
(449 letters)
>mm_chr2_132595059_132595909
Length = 851
Score = 826 bits (427), Expect = 0.0
Identities = 446/453 (98%), Gaps = 5/453 (1%)
Strand = Plus / Minus
Query: 1 agcatagcgacacactattggcttactcaaacatcagcagaaaaattacatgtacgtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agcatagcgacacactattggcttactcaaacatcagcagaaaaattacatgtacgtgca 616
Query: 61 gggtgtcagagttctgtgagttgttgactcagttcagatagccctgttatgtcttcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gggtgtcagagttctgtgagttgttgactcagttcagatagccctgttatgtcttcacat 556
Query: 121 tcctctttatctttaaggtc-ttttttttttttaagagtccttttatg-tcttccagtgg 178
|||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||
Sbjct: 555 tcctctttatctttaaggtctttttttttttttaagagtccttttatgct-ttccagtgg 497
Query: 179 cagggccacttccatgtacataaacgaattttttttt--aatgtgtttccttcttgtaga 236
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 496 cagggccacttccatgtacataaacgaattttttttttaaatgtgtttccttcttgtaga 437
Query: 237 ttatcacttgtcttttgagatgaaactatcttcaggaggtagataaaaatgtttagagtg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttatcacttgtcttttgagatgaaactatcttcaggaggtagataaaaatgtttagagtg 377
Query: 297 aagccttggaatttcttttcccatatggatggtattttttgtttgttgagacagtttctc 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 376 aagccttggaatttcttttcccatacggatggtattttttgtttgttgagacagtttctc 317
Query: 357 tatgtagccctggctgtcctagaactcactctgcagaccaggctgtgaatgtttttattt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tatgtagccctggctgtcctagaactcactctgcagaccaggctgtgaatgtttttattt 257
Query: 417 tgaagccaaggtttcattctataatccaggatg 449
|||||||||||||||| ||||||||||||||||
Sbjct: 256 tgaagccaaggtttcactctataatccaggatg 224
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 851
Length adjustment: 10
Effective length of query: 439
Effective length of database: 841
Effective search space: 369199
Effective search space used: 369199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|