TXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCAAGAGGATCCGCGGAATT
CCACTTTCCAATGCTCCTCCTACTTAAGAAGAACAAGCTTGATAACCATG
TTGTTGATTCTTTTAGACACTTCGCTCACTAATTAGTACAGGCTCCTTAT
CATTATATTTTATAGAGTCATTAAATCTGTTGGACAAGCAATATGATCTC
ATTTGACTTATGATATCAATCAGGGAAAAAGAGAAAGCAATGGATGCTTT
CTTTAGGCTCCTCCAAGTTGTTACATGTAAAAGCAGATAATCGTAACCAT
GTAATTTATATTCATTCGAAAATTCAAAATCCTGTGTTGGTGGGGCGCCC
CCACAGACAAAGGCGCTTGCTCCTTAAGCCTGATGGTGATTTGAGTTCCA
ATCTGAAACGCAGGGTGGAAGGAGAGAAGACTCCTGAAAGTTGTCCTGTG
ACATCTACTCATTTCCCATGCACAAAGCATGCACACATATAGACAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTAATAATA
ATAATTAAGACAACTAATAAATACTAGTAGATATTTCTAGAAAGACTCTC
TTTTAGAACCTCAATTTTATATGCTTGAAGAGACTATTATCTGAGATAAC
TCTTCTCATATTCCTGGTAAGTTAAAATATCTTTTTATAAATATATGTCA
TATN

ACAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTCAGAACTAGAAGAGGAACAATTATAGG
AACCAGAGCGATCAAGGACACCATCAGATCACAGACCACAGAGTCAACTA
ACTAGTGCTCATAGGAGCCTACAGAGACTGAAGCACAGCTAGGGAACCTG
GAAAATCTGACCTAGTCCCCTATAATAAATAATATTNNNNNNTANNNNNN
ATTTGTAGGTGGNNGGGNCCTGGGGGGGCGGGGGGGGGGGGCGGGGGGGG
GGGGGGGGGGGGGCGGGGCTCANANANNTTTNNAATTTTTTTGGNATGTT
TTCGGGNNATNNTTGGCNNNGGGGGGGGGGGGGGCGGGGGGGGGATTTTA
TTNTTGTGGNTGGGGGGGGGGGGGGGGGGGGGGCCCCNNNNNNNNNTNNN
NNNNNNGGAAAAGATATAAANAATCANNAAAANAAAAAAAAAAAAAANNN
NNNNGGNNNNNGAAAAAAGGGGGGGGGGGNNNNTCTNNAANNNNNAAAAA
TNNAAANAAAANANAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAANNN
NNANNNNNAANAANNANAAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAA
ANANNNAAAAAAAAAAAAAATTNAAAGGGGTGGGGGGGGGGGGGTGCTGG
GGGGGGGGGGTGGGG

Query= MSMg01no460_j13.b1 MSMg01no460_j13.b1 CHROMAT_FILE:
MSMg01no460_j13.b1 PHD_FILE: MSMg01no460_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:53 2005
         (548 letters)



>mm_chr2_16610587_16611534
          Length = 948

 Score =  872 bits (451), Expect = 0.0
 Identities = 472/479 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gctcctcctacttaagaagaacaagcttgataaccatgttgttgattcttttagacactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gctcctcctacttaagaagaacaagcttgataaccatgttgttgattcttttagacactt 437

                                                                       
Query: 61  cgctcactaattagtacaggctccttatcattatattttatagagtcattaaatctgttg 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cgctcactaattagtataggctccttatcattatattttatagagtcattaaatctgttg 377

                                                                       
Query: 121 gacaagcaatatgatctcatttgacttatgatatcaatcagggaaaaagagaaagcaatg 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 376 gacaagcaatatgatctcatttgacttatgatatcagtcagggaaaaagagaaagcaatg 317

                                                                       
Query: 181 gatgctttctttaggctcctccaagttgttacatgtaaaagcagataatcgtaaccatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gatgctttctttaggctcctccaagttgttacatgtaaaagcagataatcgtaaccatgt 257

                                                                       
Query: 241 aatttatattcattcgaaaattcaaaatcctgtgttggtggggcgcccccacagacaaag 300
           || | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaatcataatcattcgaaaattcaaaatcctgtgttggtggggcgcccccacagacaaag 197

                                                                       
Query: 301 gcgcttgctccttaagcctgatggtgatttgagttccaatctgaaacgcagggtggaagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gcgcttgctccttaagcctgatggtgatttgagttccaatctgaaacgcagggtggaagg 137

                                                                       
Query: 361 agagaagactcctgaaagttgtcctgtgacatctactcatttcccatgcacaaagcatgc 420
           ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 136 agagaagactcctgaaagttgtcctgtgacatctactcacttcacatgcacaaagcatgc 77

                                                                      
Query: 421 acacatatagacagagagagagagagagagagagagagagagagagagagagagagaga 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  acacatatagacagagagagagagagagagagagagagagagagagagagagagagaga 18


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)