MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-460M14
Chromosome	2 (Build37)
Map Location	13,312,259 - 13,312,528
singlet/doublet	singlet
Overlap gene	Cubn
Upstream gene	2310047O13Rik, LOC100040837, Pter, C1ql3, Rsu1
Downstream gene	Trdmt1, Vim, St8sia6, Ptpla, Stam, 2010003H20Rik, Mrc1, Slc39a12
Link	Open Mouse BAC browser

Click to get alignment info.

name	2310047O13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66960 MGI:1914210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040837 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Pter (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19212 MGI:107372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1ql3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227580 MGI:2387350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rsu1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20163 MGI:103040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cubn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:65969 MGI:1931256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trdmt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13434 MGI:1274787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vim (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22352 MGI:98932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St8sia6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241230 MGI:2386797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptpla (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30963 MGI:1353592
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Stam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20844 MGI:1329014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2010003H20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625286 MGI:1919309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17533 MGI:97142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc39a12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277468 MGI:2139274
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310047O13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70980532 GeneID:66960 MGI:1914210
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310047O13 gene transcript_id : NM_024185.4

name	Pter (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89111133 GeneID:19212 MGI:107372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphotriesterase related transcript_id : NM_008961.2

name	C1ql3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109689714 GeneID:227580 MGI:2387350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q-like 3 transcript_id : NM_153155.2

name	Rsu1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130544 GeneID:20163 MGI:103040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras suppressor protein 1 transcript_id : NM_009105.3

name	Cubn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487347 GeneID:65969 MGI:1931256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cubilin (intrinsic factor-cobalamin receptor) transcript_id : NM_001081084.1

name	Trdmt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802352 GeneID:13434 MGI:1274787
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tRNA aspartic acid methyltransferase 1 transcript_id : NM_010067.3

name	Vim (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32189314 GeneID:22352 MGI:98932
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vimentin transcript_id : NM_011701.3

name	St8sia6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22003887 GeneID:241230 MGI:2386797
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 transcript_id : NM_145838.1

name	Ptpla (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60031667 GeneID:30963 MGI:1353592
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a transcript_id : NM_001012396.1

name	Ptpla (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:60031580 GeneID:30963 MGI:1353592
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a transcript_id : NM_013935.2

name	Stam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560544 GeneID:20844 MGI:1329014
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 transcript_id : NM_011484.2

name	2010003H20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486798 GeneID:625286 MGI:1919309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010003H20 gene transcript_id : NM_001081310.1

name	Mrc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678931 GeneID:17533 MGI:97142
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannose receptor, C type 1 transcript_id : NM_008625.1

name	Slc39a12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59858550 GeneID:277468 MGI:2139274
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 39 (zinc transporter), member 12 transcript_id : NM_001012305.1

name	2310047O13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15277329 CCDS:CCDS15690.1 GeneID:66960 MGI:1914210
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 note : caspase recruitment domain containing protein product : 2310047O13Rik protein protein_id : NP_077147.2

name	Pter (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679525 CCDS:CCDS15691.1 GeneID:19212 MGI:107372
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0009056 - catabolism [Evidence IEA] codon_start : 1 note : parathion hydrolase (phosphotriesterase)-related protein product : phosphotriesterase related protein_id : NP_032987.1

name	C1ql3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23680960 CCDS:CCDS15692.1 GeneID:227580 MGI:2387350
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : gliacolin; C1q-like product : C1q-like 3 protein_id : NP_694795.1

name	Rsu1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982028 CCDS:CCDS15693.1 GeneID:20163 MGI:103040
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007265 - Ras protein signal transduction [Evidence IMP] codon_start : 1 product : Ras suppressor protein 1 protein_id : NP_033131.2

name	Cubn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487348 GeneID:65969 MGI:1931256
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005903 - brush border [Evidence IDA]; GO:0005905 - coated pit [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0030139 - endocytic vesicle [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005768 - endosome [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA] GO_function : GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0031419 - cobalamin binding [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence TAS] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006898 - receptor mediated endocytosis [Evidence IMP]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] codon_start : 1 product : cubilin (intrinsic factor-cobalamin receptor) protein_id : NP_001074553.1

name	Trdmt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560601 CCDS:CCDS15695.1 GeneID:13434 MGI:1274787
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016428 - tRNA (cytosine-5-)-methyltransferase activity [Evidence IEA] GO_process : GO:0006306 - DNA methylation [Evidence IEA]; GO:0008033 - tRNA processing [Evidence IEA] codon_start : 1 exception : mismatches in translation note : DNA methyltransferase 2 product : tRNA aspartic acid methyltransferase 1 protein_id : NP_034197.2

name	Vim (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982755 CCDS:CCDS15696.1 GeneID:22352 MGI:98932
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] [Evidence ISS]; GO:0005882 - intermediate filament [Evidence IEA]; GO:0045098 - type III intermediate filament [Evidence TAS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IMP] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0045103 - intermediate filament-based process [Evidence IMP] codon_start : 1 product : vimentin protein_id : NP_035831.2

name	St8sia6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003888 CCDS:CCDS15697.1 GeneID:241230 MGI:2386797
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence IEA]; GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008373 - sialyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IDA]; GO:0009247 - glycolipid biosynthesis [Evidence IDA]; GO:0006486 - protein amino acid glycosylation [Evidence IEA]; GO:0006493 - protein amino acid O-linked glycosylation [Evidence IDA] codon_start : 1 note : alpha-2, 8-sialyltransferase; ST8Sia VI; alpha2,8-sialyltransferase VI; sialyltransferase 8 (alpha-2, 8-sialyltransferase) F product : sialyltransferase 8 F protein_id : NP_665837.1

name	Ptpla (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60031581 GeneID:30963 MGI:1353592
definition	codon_start : 1 exception : unclassified translation discrepancy note : isoform 1 is encoded by transcript variant 1 product : protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a isoform 1 protein_id : NP_038963.2

name	Ptpla (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60031668 GeneID:30963 MGI:1353592
definition	codon_start : 1 exception : unclassified translation discrepancy note : isoform 2 is encoded by transcript variant 2 product : protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a isoform 2 protein_id : NP_001012396.1

name	Stam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755668 CCDS:CCDS15698.1 GeneID:20844 MGI:1329014
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 protein_id : NP_035614.1

name	2010003H20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486799 GeneID:625286 MGI:1919309
definition	codon_start : 1 product : hypothetical protein LOC625286 protein_id : NP_001074779.1

name	Mrc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678932 CCDS:CCDS15700.1 GeneID:17533 MGI:97142
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005537 - mannose binding [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IDA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : macrophage mannose receptor 1 product : mannose receptor, C type 1 protein_id : NP_032651.1

name	Slc39a12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59858551 CCDS:CCDS15701.1 GeneID:277468 MGI:2139274
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046873 - metal ion transporter activity [Evidence IEA] GO_process : GO:0030001 - metal ion transport [Evidence IEA] codon_start : 1 product : solute carrier family 39 (zinc transporter), member 12 protein_id : NP_001012305.1

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 8 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 7 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 6 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 5 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 4 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 3 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 2 pseudo : _no_value

name	LOC100040837 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040837
definition	number : 1 pseudo : _no_value

clone name	MSMg01-333F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022D04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-460M14.T7 (MSMg01no460_m14.b1)	MSMg01-460M14.TJ (MSMg01no460_m14.g1)
ACC	AG546061	AG546062
length	756	1,142
length of high quality (start - end)	271 (59 - 329)	---
definition	CHROMAT_FILE: MSMg01no460_m14.b1 PHD_FILE: MSMg01no460_m14.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:34:08 2005	CHROMAT_FILE: MSMg01no460_m14.g1 PHD_FILE: MSMg01no460_m14.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:34:09 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGAATTCACT AATTACCTTGGGCTCATAGATCATCTCTAAAGTGAGCCCCATACCTTCAT GCCTAACTCGTGTTGTTAGGAATTTCAAGCAAGATACTGTGCTTATTAGA AGCATTTGAGAACTAAACTGCCGTATACATGGAACTGTTTTTAAAAGCTT ACAACTTAATGAATAATTTTGTATCTTTTTTTTCTATTGCTAGCTAAATT TTTAGCCAATAATTCTACTCCTAGCTCCAAGGTTTATTTGTGTGTGTGTG TGTGTGTTTGTGTGTGTGTCTGTGTGNGNGNCTGNGTGNGTGTTTTTTTT TGCCCTCCCCCCCGCGCCGTTGGGTGTCTTTTGTCTCTCTTGGCTCTTCC CGGCCTCCTCCTTTTTCTTTGCTTGCGCGCGCGTCCTGCTCTTCTTTCCT CCTCCTCCTCTCCCTCGCCCCTGCTTTCTGCTCTTTCCGCGGTCTCCCCT CTTTTTCCTTCCCTTTCTCTTTTTTTTCCTCTTCTTTTTCCTGCTCCGCC CTTTCTCTCCTTCTGTGTTCCCTTCCTTTTTTTCTCCCCGCCCGTCTTTT CCTTTTTGTCCCGTTTCTTTTTCCTTCTTTTTTCTCTTTGTTTCTTCTGG CCCTCCGCTATTCCGGTTCTTTTTTTCTTCCCCTTCCTCCCCTTTCCTCT CTCCTTCCTTTTGTCCTTCTTCTCGCCTCGCTTTTCTCCCCCTTCTCTCT CGCCTC	GGCAGTAATCATATGGCGTGGAATTACAGAATAACACAATAACCACAAAA AAATTAATAAAGAATTGACATAAAAGAGAGAAAGACTTCGTGCTCTGATA TCGCACGAAACGTGTGATATAAAGAACAAAAAAATCATTACCATCCCTAG CTTACCCACCTGCCAATTTCCTTTCNTCTTATCTCCCCCCAACACACCAC ACTCCACCTCCCACAACTCTATTATCACCTCCTCCCTTTAATTACATATA CTCCATATTGCTTCAACATCTCACTATTCTCGTTTCCCTCTTTCCCTCAC TTCCCTTTCATCTTGTATTACGCATACTGTTATTTGTACAGATACCAGTA GTCTGTTAACTAAAATAGATATATCCGAATAAAGCACTAATGTCATCTTC TGTTAAAAATAGAATTTGTAGTAAACCACACGACGTAGACAACTGATTTG ACGTATGTATTTTAGGAACGAGTTATTACCCATGTGCACTCTTATGTGCT CCATTTATCTACTAAACCACTATATCAAATAATAAACACCTACGTATACC TCTTATTACGACCCTACTGTATATTCCCCTCATAATACCCCCTTTGACCG CTAATCATACATATCAACAGAAGAACCAAGAATATACAAAAAATGTACTT TATTCACGTATTACTCACTAATTCCGCACAGCACCCTAACACCGCATAAT AAACAACTATGACCTAATATATTATCTCGCATATATACATTTAGATACAC ATATAGCACCAGCATCTCACTATATATCAATAATTGCAGATTATATTAAC ACGCCGTACGTCTCTCACTTCTGCAGATTGCATACTCTATAATAAACCTC ATACACATGCGAGCAGTGTCTTATATTTCTGTACCCAACACAAATATATA TCCACCTATTACTACTTTGTTCACACCTATTTCTTCCTTTCTCTCCCTCA TATAGTACACCTCAAAGAAGTATCATTATTATCACACGCCCACCCGATCT TTGTAGCCACTCCTTATGCATGTATGTAATACATCTACGCGATCACACAG ACCATATGTATACTACGAAGTCGCATACCATATCACGTTCATACTAATTC TCTATATCTCATATATGAAGCACCACATGCCTCCATATGTAG
quality values	Open. Hide. 28 32 32 33 32 37 32 26 19 15 15 8 8 8 11 10 12 22 22 23 19 17 7 6 6 6 6 6 6 11 13 19 13 12 10 11 12 17 28 37 47 31 31 31 31 37 33 31 21 19 9 6 6 6 6 6 6 15 23 30 28 28 28 34 37 37 37 47 48 53 53 42 42 42 43 57 57 57 57 53 53 53 53 53 53 57 68 68 68 68 68 68 68 68 68 47 50 50 50 50 50 68 68 57 59 57 57 57 57 43 43 41 43 43 47 59 59 68 68 51 51 50 50 50 50 57 57 57 57 68 68 68 68 68 68 51 51 68 68 68 68 68 68 68 68 68 68 57 59 59 59 57 57 57 51 51 50 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 53 57 57 57 53 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 25 25 12 8 8 8 8 8 8 12 12 23 23 37 41 59 59 59 59 59 59 41 41 23 23 3 0 3 0 3 0 3 23 3 0 3 13 3 0 3 18 18 13 13 15 27 34 32 24 15 8 8 8 8 9 8 8 8 8 9 12 11 12 12 9 8 8 6 6 8 8 10 10 10 8 8 8 6 6 8 8 8 8 8 10 10 10 10 8 8 6 6 8 8 8 8 8 10 10 10 8 8 8 8 8 6 6 6 6 6 6 10 10 8 8 8 8 8 10 6 6 6 8 8 10 8 8 7 7 7 8 10 10 8 10 6 6 8 6 7 7 6 8 8 8 10 8 8 6 6 8 8 10 10 10 10 10 9 9 9 9 9 8 8 8 8 8 8 10 6 6 6 8 10 10 12 10 13 10 9 8 8 15 8 8 8 8 6 6 6 6 8 6 9 9 15 12 11 10 9 10 10 8 8 8 9 10 10 12 10 8 8 8 8 8 8 10 9 10 8 8 8 9 9 8 9 9 8 8 6 7 7 7 8 8 10 15 16 10 11 11 12 9 8 8 8 8 6 6 6 6 10 9 10 10 12 9 8 8 6 6 8 8 8 8 8 8 8 9 9 9 9 13 9 9 9 11 11 11 11 17 11 8 8 8 8 11 12 21 18 13 13 10 11 11 11 11 11 11 13 8 6 6 6 6 8 8 8 8 10 12 11 11 11 12 12 12 14 19 17 11 11 11 16 12 10 7 7 13 12 26 21 15 12 9 9 9 15 9 9 7 7 6 6 6 8 8 10 8 8 8 8 8 8 8 8 8 11 11 10 10 10 12 10 8 6 8 7 7 7 9 14 18 19 15 10 8 8 11 8 8 9 7 8 7 8 8 8 10 8 6 6 7 7 9 8 9 8 13 10 8 8 8 8 8 10 10 6 7 10 10 8 8 8 8 9 9 11 13 12 9 9 9 8 8 8 7 7 6 6 6 6 8 8 8 10 10 12 15 12 12 10 12 8 8 8 8 8 8 8 10 8 8 8 8 8	Open. Hide. 6 6 6 8 8 10 9 10 8 8 8 8 8 8 10 11 11 9 8 8 8 8 8 8 9 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 10 10 22 12 12 9 9 9 10 10 8 10 10 10 10 9 9 9 9 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 6 9 8 11 8 8 8 10 11 9 9 6 6 8 8 8 8 11 12 11 11 11 12 12 12 12 10 10 10 10 8 8 8 8 8 8 8 8 10 10 9 11 8 8 6 6 10 10 11 8 8 7 6 6 6 6 8 8 8 6 6 8 8 8 10 10 10 10 8 8 6 6 6 7 8 9 9 8 8 8 8 10 10 14 10 10 9 9 9 9 11 12 3 0 3 8 8 8 8 8 8 8 8 8 8 12 12 9 8 8 6 6 8 6 6 10 8 8 8 8 9 8 8 7 6 8 8 10 10 10 8 8 6 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 6 7 10 12 12 10 6 6 6 6 10 10 10 8 6 6 6 8 8 9 9 12 11 10 8 8 8 8 9 8 8 6 6 8 8 9 9 9 9 9 9 9 10 17 13 10 6 6 6 6 8 8 10 10 10 10 10 10 11 12 13 12 11 8 8 8 8 9 13 13 10 10 7 7 8 6 8 9 9 7 8 8 8 8 9 10 10 10 9 10 11 12 12 11 9 9 9 8 8 10 8 8 8 8 8 8 8 6 8 7 6 8 8 8 8 8 8 8 8 8 9 9 9 10 8 8 6 6 8 8 8 8 10 10 10 6 6 6 6 8 8 10 9 11 11 8 8 6 6 8 8 10 10 8 8 8 8 9 8 9 9 9 7 8 8 8 7 7 8 7 11 11 11 11 10 8 8 8 8 10 13 13 11 12 10 10 10 10 10 10 12 12 12 12 10 10 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 13 10 6 6 6 6 6 10 11 8 6 7 7 6 8 6 8 8 11 11 11 9 10 12 10 10 10 18 12 12 12 12 11 11 11 11 11 11 10 9 9 10 10 8 8 6 6 8 8 12 15 12 10 9 7 8 8 9 9 13 10 10 10 13 13 10 8 8 8 10 8 8 10 10 10 8 10 9 9 9 6 10 6 6 6 6 8 8 9 9 8 8 6 6 8 8 8 9 8 10 8 6 8 6 6 6 6 8 8 8 8 8 8 8 6 6 8 10 10 11 10 10 11 12 8 10 10 8 10 8 8 8 6 6 7 10 8 14 16 15 14 12 11 11 11 9 9 9 16 17 10 10 9 9 8 8 6 6 8 8 9 10 11 10 10 10 8 8 8 8 8 8 15 13 9 9 11 11 11 13 11 9 8 8 8 8 10 13 12 7 6 6 6 10 10 8 7 6 6 6 8 8 8 8 8 6 10 8 12 8 8 8 8 7 8 6 6 10 8 8 8 9 9 9 9 8 8 9 9 9 9 8 8 8 8 8 8 10 8 8 8 8 8 6 6 8 8 8 8 8 10 8 8 8 8 8 8 6 6 6 10 8 8 8 10 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 6 8 6 7 8 10 8 9 9 10 11 22 13 11 10 10 6 6 8 8 10 10 9 9 9 6 6 6 6 8 8 6 6 6 8 9 11 13 10 6 7 6 6 6 6 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 8 6 6 6 6 6 8 6 6 8 6 7 8 10 17 11 10 10 8 8 8 8 8 8 8 8 8 10 10 9 8 8 6 6 6 6 10 7 9 10 9 9 10 10 10 10 13 10 8 8 8 8 8 8 8 6 6 6 6 8 9 9 8 8 6 7 8 8 6 6 6 10 8 6 6 6 6 8 8 8 8 8 12 12 9 9 10 10 15 12 13 10 8 12 8 11 12 8 8 8 8 8 8 8 8 13 7 7 10 8 9 9 9 9 8 9 9 6 8 6 6 8 8 10 10 10 9 9 9 10 10 10 11 13 13 18 19 19 9 9 9 8 8 8 8 8 8 8 8 8 8 7 6 8 6 6 8 6 6 6 8 9 7 9 9 6 8 6 6 8 6 10 11 10 9 10 9 9 9 18 17 15 10 9 9 8 8 8 8 8 8 11 10 8 6 6 6 6 6 6 6 6 7 6 6 6 7 6 6 6 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 10 10 8 8 8 8 8 7 6 7 8 8 8 8 10 10 10 9 9 9 10 9 9 9 9 10 9 6 6 7 6 10 6 8 8 8 8 6 6 8 8 8 8 8 13 8 8 6 6 8 8 8 6 6 6 6 6 6 8 8 9 11 9 10 10 8 10 10 8 8 8 8 7 7 7 8 8 12 9 7 6 6 6 6 10 8 8 8 8 9 12 11 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no460_m14.b1 MSMg01no460_m14.b1 CHROMAT_FILE:
MSMg01no460_m14.b1 PHD_FILE: MSMg01no460_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:08 2005
         (271 letters)



>mm_chr2_13312097_13312769
          Length = 673

 Score =  472 bits (244), Expect = e-137
 Identities = 263/270 (97%), Gaps = 2/270 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgggctcatagatcatctctaaagtgagccccataccttcatgcctaactcgtgttgtta 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgggctcacagatcatctctaaagtgagccccataccttcatgcctaactcgtgttgtta 373

                                                                       
Query: 61  ggaatttcaagcaagatactgtgcttattagaagcatttgagaactaaactgccgtatac 120
           |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 372 ggaatttcaagcaatatactgtgcttattaaaagcatttgagaactaaactgccgtatac 313

                                                                       
Query: 121 atggaactgtttttaaaagcttacaacttaatgaataattttgtatc--ttttttttcta 178
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 312 atggaactgtttttaaaagcttacaacttaatgaataattttgtatcttttttttttcta 253

                                                                       
Query: 179 ttgctagctaaatttttagccaataattctactcctagctccaaggtttatttgtgtgtg 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttgctagctaaatttttagccaataattctactcctagctccaaggtttatttgtgtgtg 193

                                         
Query: 239 tgtgtgtgtgtttgtgtgtgtgtctgtgtg 268
           ||||||||||| ||||||||||| ||||||
Sbjct: 192 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 163


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 673
Length adjustment: 9
Effective length of query: 262
Effective length of database: 664
Effective search space:   173968
Effective search space used:   173968
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information