Query= MSMg01no460_m17.b1 MSMg01no460_m17.b1 CHROMAT_FILE:
MSMg01no460_m17.b1 PHD_FILE: MSMg01no460_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:09 2005
(532 letters)
>mm_chr2_151778603_151779532
Length = 930
Score = 982 bits (508), Expect = 0.0
Identities = 526/532 (98%), Gaps = 2/532 (0%)
Strand = Plus / Plus
Query: 1 tgtaagtagcctctgagaagcaacagaagataatgagtaagtagtagtagtcagacagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaagtagcctctgagaagcaacagaagataatgagtaagtagtagtagtcagacagtg 260
Query: 61 gaaggcgcgtcttcacttggaggaggctcagcgcagtgtccagggtcctgggaacgctgg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaggcgcatcttcacttggaggaggctcagcgcagtgtccagggtcctgggaacgctgg 320
Query: 121 cttcccaacctttgtgatggctgcaggtgtgttcagtttgttcttgcacttaaagtgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcccaacctttgtgatggctgcaggtgtgttcagtttgttcttgcacttaaagtgtgt 380
Query: 181 ctctccatgaagtcaggcatgtgaggaaggagcagacatgttcacacacacttaaaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctccatgaagtcaggcatgtgaggaaggagcagacatgttcacacacacttaaaaggg 440
Query: 241 aaagaaagtctattctgggaagaaaatatgatttttgtagaggaattcgggggcagttaa 300
|||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 aaagaaagcc-attctgggaagaaaatatgatttt-gtagaggaattcgggggcagttaa 498
Query: 301 actgcatgtggcttcccctgtgacataggcattgcactttctagggccctccctgacaca 360
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 499 actgcatgtggctttccctgtgacataggcattgcactttctagggccttccctgacaca 558
Query: 361 tcatgaatattctgtgcttctaagaaaagactggcttccactcaaataaataaatgatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tcatgaatattctgtgcttctaagaaaagactggcttccactcaaataaataaatgatac 618
Query: 421 tgtttatctgggcacattcaagaacttcagtcttagtcgcaaaagcaaacactctgcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgtttatctgggcacattcaagaacttcagtcttagtcgcaaaagcaaacactctgcatc 678
Query: 481 ttgtcccagtgatgggctccgtggtaaggaaagcctccaacacaggcagcct 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgtcccagtgatgggctccgtggtaaggaaagcctccaacacaggcagcct 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 930
Length adjustment: 10
Effective length of query: 522
Effective length of database: 920
Effective search space: 480240
Effective search space used: 480240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_m17.g1 MSMg01no460_m17.g1 CHROMAT_FILE:
MSMg01no460_m17.g1 PHD_FILE: MSMg01no460_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:09 2005
(424 letters)
>mm_chr2_151960849_151961673
Length = 825
Score = 646 bits (334), Expect = 0.0
Identities = 346/350 (98%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 1 ctggagac-cagcagcccacttgaggctgggagtcccatgctaaggatgggagagtggaa 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctggagacacagcagcccacttgaggctgggagtcccatgctaaggatgggagagtggaa 291
Query: 60 agatggggcagttgagtctccgatgactctttaaagagccatagtagcctctgtacaaag 119
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 290 agatggggcagttgagtctctgatgactctttaaagagccatagtagcctctgtacaacg 231
Query: 120 tcttcaaagcctgatgtggtcatgactctcctgtaatcacctgaataaacccaatgtgca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tcttcaaagcctgatgtggtcatgactctcctgtaatcacctgaataaacccaatgtgca 171
Query: 180 caagattgagctaatcaacagtctatcgtggagtggggagggcctcgtgagacctcatcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 caagattgagctaatcaacagtctatcgtggagtggggagggcctcgtgagacctcatcc 111
Query: 240 ctcctggcaactaatggttgttggggaagggagagacgtttcccctctgtggtatagatg 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ctcctggcagctaatggttgttggggaagggagagacgtttcccctctgtggtatagatg 51
Query: 300 ttcataagttgctgtgcttgggcagacagtctcttacatatgctcctgta 349
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ttcataagttgctgtgcttgggcagacagtctcttacatatgctcctgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 825
Length adjustment: 9
Effective length of query: 415
Effective length of database: 816
Effective search space: 338640
Effective search space used: 338640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
