Query= MSMg01no461_b24.b1 MSMg01no461_b24.b1 CHROMAT_FILE:
MSMg01no461_b24.b1 PHD_FILE: MSMg01no461_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:36 2005
(435 letters)
>mm_chr2_161460386_161461220
Length = 835
Score = 787 bits (407), Expect = 0.0
Identities = 428/435 (98%)
Strand = Plus / Minus
Query: 1 ccattttacacattcattgtcatggttcctgacattctgggagttgttactcaaagaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ccattttacacattcattgtcatggttcctgacattctgggagttgttactcaaagaagc 576
Query: 61 ctttgaaatttagtcactgggagtctgggaatgtataaatcactcccccaatcccttgaa 120
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 575 ctttgaaatttagtcactgggagtctaggaatgtataaatcacacccccaatcccttgaa 516
Query: 121 cagcacggggtctaaaggggaggccttcagtgcacacacaaatgagcgaatctcggtttg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 515 cagcacggggtctaaaggggaggtcttcagtgcacacacaaatgagcgaatctcggtttg 456
Query: 181 gcttctacctggctctgccaagtagaagaggcaagagaaatggcaaagcaacatttataa 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gctgctacctggctctgccaagtagaagaggcaagagaaatggcaaagcaacatttataa 396
Query: 241 cagattggttctcacctgtctggttgggtgcacgtgtagacatggagatgtagcttatct 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 395 cagattggttctcacctgtctggttgggtgcatgtgtagacatggagatgtagcttatct 336
Query: 301 ggggggagggggaggctactgttgacaatgaacacctgttacacaggtctggtccatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggggggagggggaggctactgttgacaatgaacacctgttacacaggtctggtccatgta 276
Query: 361 gtcatgggaagccagcttcccaacttgctctgagagccacaggctttctataattagtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtcatgggaagccagcttcccaacttgctctgagagccacaggctttctataattagtgt 216
Query: 421 aacttatctaccagc 435
||||| | |||||||
Sbjct: 215 aacttctttaccagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no461_b24.g1 MSMg01no461_b24.g1 CHROMAT_FILE:
MSMg01no461_b24.g1 PHD_FILE: MSMg01no461_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:36 2005
(487 letters)
>mm_chr2_161269825_161270710
Length = 886
Score = 895 bits (463), Expect = 0.0
Identities = 481/487 (98%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 1 attttctatatgatccagaatcaccatagatggacatacattgtatcctctagatgagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttctatatgatccagaatcaccatagatggacatacattgtatcctctagatgagaa 260
Query: 61 gacaacagaaactgagcaaccgattccctgtaaccaaatacccatagcccaaggagccat 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gacaacagaaactgagcaaccgattcccggtaaccaaatacccatagcccaaggagccat 320
Query: 121 cgtacagtttttggcaaatggcaggagagaaaaatggatgataataacattgatccttgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtacagtttttggcaaatggcaggagagaaaaatggatgataataacattgatccttgc 380
Query: 181 tttagaaaatttggattattttgtgtttaattatggagctagaaatttctcttcattgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttagaaaatttggattattttgtgtttaattatggagctagaaatttctcttcattgtt 440
Query: 241 cctggagtatttaccagcgattaacctatatagtaccttataaaaagaacctgctgagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctggagtatttaccagcgattaacctatatagtaccttataaaaagaacctgctgagga 500
Query: 301 ggttgtgggtaagactctgatcaagttccgtgatggggatgaactaaaaataaagttagc 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ggttgtgggtaagactctgatcaagttccgtgatgggaatgaactaaaaataaagttagc 560
Query: 361 atagagcaccaataaaagttccaagcccttgaaaaaaaaatctctcatatttttagagcc 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 atagagcaccaataaaagttccaagcccttgaaaaaaaa-tctctcatatttttagagcc 619
Query: 421 aagcaaatatcaacattgtgattatacattattttggacattatggcatttctgtatttt 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 620 aagcaaatatcaacattgtgattatacattattttggaaattatggcatttctatatttt 679
Query: 481 aaaactt 487
|||||||
Sbjct: 680 aaaactt 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 886
Length adjustment: 10
Effective length of query: 477
Effective length of database: 876
Effective search space: 417852
Effective search space used: 417852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
