Query= MSMg01no462_n03.b1 MSMg01no462_n03.b1 CHROMAT_FILE:
MSMg01no462_n03.b1 PHD_FILE: MSMg01no462_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:57 2005
(343 letters)
>mm_chr2_172688188_172688928
Length = 741
Score = 630 bits (326), Expect = 0.0
Identities = 338/342 (98%), Gaps = 2/342 (0%)
Strand = Plus / Minus
Query: 1 gtgcgtgctcccatgcccccaccccctccgtgtacaagtgctggtctttgtttgacctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtgcgtgctcccatgcccccaccccctccgtgtacaagtgctggtctttgtttgacctgt 481
Query: 61 ttagggtgtcggtgacagaaagaatgacaggtggccccgggcctccattccaacatgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttagggtgtcggtgacagaaagaatgacaggtggccccgggcctccattccaacatgtcc 421
Query: 121 tttgagtggtccctaaaataataccattagcgggtcgcattaaggctgcttatctctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tttgagtggtccctaaaataataccattagcgggtcgcattaaggctgcttatctctggc 361
Query: 181 ggagcctgctgataatgccgagcgagcaggtcctcctggaatgctggggcccggatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggagcctgctgataatgccgagcgagcaggtcctcctggaatgctggggcccggatagag 301
Query: 241 aagtgcctgtatagtccctgatgaacgggcaggccttggcatccgttgtcccgatgacga 300
||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagtgcctg-agagcccctgatgaacgggcaggccttggcatccgttgtcccgatgacga 242
Query: 301 tgacattccatcgggtttgacatcctgctcccgcagcactaa 342
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 tgacattccatcgggtttgaca-cctgctcccgcagcactaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 741
Length adjustment: 9
Effective length of query: 334
Effective length of database: 732
Effective search space: 244488
Effective search space used: 244488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_n03.g1 MSMg01no462_n03.g1 CHROMAT_FILE:
MSMg01no462_n03.g1 PHD_FILE: MSMg01no462_n03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:57 2005
(434 letters)
>mm_chr2_172461046_172461879
Length = 834
Score = 816 bits (422), Expect = 0.0
Identities = 431/434 (99%)
Strand = Plus / Plus
Query: 1 catgctggctgaacctggtcagggggttgtggggggacacggaaggttaatcagacttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgctggctgaacctggtcagggggttgtggggggacacggaaggttaatcagacttta 260
Query: 61 ctggagcctggaccatggatctaaagccccacggaggcaggcatgatgagcaggccgagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ctggagcctggaccatggatctaaagccccacggaggcaggcatgatgaggaggccgagc 320
Query: 121 aggagcaagccagagcctgtcccatccggagactggcagccactcagcttgcatgctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagcaagccagagcctgtcccatccggagactggcagccactcagcttgcatgctcca 380
Query: 181 ggtcggccttgctcaccatctctgctcttccacttggaagggcatcaggtggctgggtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcggccttgctcaccatctctgctcttccacttggaagggcatcaggtggctgggtga 440
Query: 241 catttcctgctgtctgaatttgcagagctggacccacagccttgattcctccagggactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttcctgctgtctgaatttgcagagctggacccacagccttgattcctccagggactg 500
Query: 301 acagagcacagcccactgacctcagggcaaggaccggctctctctagagcatgctggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagagcacagcccactgacctcagggcaaggaccggctctctctagagcatgctggctg 560
Query: 361 ttcctttccagtccaccctggcagagctggcgaagtccagggaacagttacctgcttctt 420
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 tccctttccagtccaccctggcagagctggtgaagtccagggaacagttacctgcttctt 620
Query: 421 ctggtgtgaagagc 434
||||||||||||||
Sbjct: 621 ctggtgtgaagagc 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
