Query= MSMg01no462_o05.b1 MSMg01no462_o05.b1 CHROMAT_FILE:
MSMg01no462_o05.b1 PHD_FILE: MSMg01no462_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:03 2005
(399 letters)
>mm_chr2_164364734_164365532
Length = 799
Score = 694 bits (359), Expect = 0.0
Identities = 384/395 (97%), Gaps = 5/395 (1%)
Strand = Plus / Plus
Query: 1 atcatcattctttttcctcctcctcctccttcccttcctcctcctcctcttcttcttctt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 206 atcatcattctttttcctcctcctcctccttctcttcctcctcctcctcttcttcttctt 265
Query: 61 ccttctccctcccctccccctcctcctttttcttccaggctaggtggagaatatttcccc 120
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccttct-----ccctccccctccccctttttcttccaggctaggtggagaatatttcccc 320
Query: 121 tcgctgcatgtctctcaatatctctccacatacccagtgaattcaggtgctatttcctct 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tcgctgcatgtctctcaatatctctccacatacccagtgagttcaggtgctatttcctct 380
Query: 181 gcgtgttcattcccaaggcaggtggaatagcctccttcatctctcatctccttcacctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcgtgttcattcccaaggcaggtggaatagcctccttcatctctcatctccttcacctgc 440
Query: 241 cctagggttcctgataaacccttcaaaccaacattctccatcaagtctcaggggcagggc 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagggttcctgaaaaacccttcaaaccaacattctccatcaagtctcaggggcagggc 500
Query: 301 ttatgtcttaattatggctccgtccctaacaccaggtcctcggtaggattcacgtttgcc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatgtcttaattatggctccatccctaacaccaggtcctcggtaggattcacgtttgcc 560
Query: 361 caatgactcaaaggtccactgtgctctccggagcc 395
|| ||||||||||||||||||||||||||||||||
Sbjct: 561 cagtgactcaaaggtccactgtgctctccggagcc 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_o05.g1 MSMg01no462_o05.g1 CHROMAT_FILE:
MSMg01no462_o05.g1 PHD_FILE: MSMg01no462_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:03 2005
(208 letters)
>mm_chr2_164534681_164535288
Length = 608
Score = 335 bits (173), Expect = 2e-96
Identities = 191/197 (96%)
Strand = Plus / Minus
Query: 1 agtgagttactttatcctggaaaaatgatatttaaacatttctgcaaaatttagaaagat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 342 agtgagttactttatcctggaaaagcgatatttaaacatttctgcaaaatttaggaagat 283
Query: 61 ttaggaagaatcgatttaggaagtctaaaggcttaaatcttttatagaaaggattatatt 120
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 282 ttaggaagaatctatttaggaagtctaagggcttaaatcttttatagaaaggattatatt 223
Query: 121 taaaagtctgtgttttactgccttagttttgtttggattttggttttatttttattttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 taaaagtctgtgttttactgccttagttttgtttggattttggttttatttttattttaa 163
Query: 181 tatttattgatttattt 197
|||||||| ||||||||
Sbjct: 162 tatttatttatttattt 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space: 119201
Effective search space used: 119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
