TCCTGTTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAGGCTTCCGATGCTTAAATGTTTCATATTGCTTTCC
AAGGTGCTGTTATTACTCAGTTCTGAAAAGGCGCCGTTTCCCAGAAGATG
TTAAGTGGCCATTAGATACTAATAAGTTAAGTTAACTGAACAGAAATGTA
TTACAGAAAAGCCATCTCAGTATTTCAGTAAGAACAAGGCTTCAGGAGAC
TACAGAGCCGCAAGACATTGTCTTTACTTTCTGACAACACCTTTAAAAAC
TGTTTTCATATTTGTTATCTCAACTAAATTAGCCTTAAGCTTACCCCTTA
TTTTCACAGGTAAAATCATCCTGGGCCAAAGCATCATAGTGGCATCTCAT
TAATTTCTTCTAAGAGCTGTGCAAAAAGGCTTTTTGGTTGGCCTGTAAAC
CCAGGAGAGAACAGAGGTTCAGTACTCAGGAAATTGCCCCACAGTCATGC
CAGGCATTTGCTAAGAGTCAGTCCTGCCTGCTATGTTGGATGTCTTGGTA
GCTTTCTATAGATTTCAGAGAACACTGTGTGGAGTTTCCTGATAAGCCCA
ATTTTCCAGTATTATATATCCCTTAGTGTGTCTCCTTCTTGAATTTACAT
CTCCCTTTCAGCTTCAAATTTCTTTCTGGACAAGTTATATAGAAAATTTC
ATTGTCCCCCCCCCCCTGTAGACGCCTCTTTTCTCTCTAT

NAAAACCTCTATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCG
AATGGCTGAGAAGCACCTGAAAAAAATGTTCAACATCCCTAATCATCAGA
GAAATGCAAATCAAAACAACCCTGAGATTACACATCACACCAGCCAGAAT
GGGTAAGATGAAAAATTCAGTTGACAGCAGATTCTGGAGAGGATATGGAG
AAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCA
CTCTGGAAATCAGTCTGGAGGTTCCTCAGAAAATTGGACATAGTACTACC
GGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTTCCAA
CTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATA
ATAGCCAGAAGCTGGAAAGAACCCGGATGCCCCTCAACAGAGGAATGGAT
ACAGAAAATGTGGTACATTTACACAATGGAATACTACTCAGCTATTAATA
AAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCA
TCCTGAGTGAAGTAACCCAATCATAAAGGAATTCCCACAATATGTACTCC
CTGATAAGTGGATATTTAGCCAGAAACTTAAGGAACCCCTAGATATTAGA
TACAACTTGGCCAATGCATGAAATTCACGAAAAAAG

Query= MSMg01no462_p07.b1 MSMg01no462_p07.b1 CHROMAT_FILE:
MSMg01no462_p07.b1 PHD_FILE: MSMg01no462_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:09 2005
         (443 letters)



>mm_chr2_22077619_22078455
          Length = 837

 Score =  803 bits (415), Expect = 0.0
 Identities = 434/443 (97%), Gaps = 6/443 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcttaaatgtttcatattgctttccaaggtgctgttattactcagttctgaaaaggcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atgcttaaatgtttcatattgctttccaaggtgctgttattactcagttctgaaaaggcg 578

                                                                       
Query: 61  ccgtttcccagaagatgttaagtggccattagatactaataagttaagttaactgaacag 120
           |||||||||||||||||||||||||||||||||||||||     ||||||||||||||||
Sbjct: 577 ccgtttcccagaagatgttaagtggccattagatactaa-----taagttaactgaacag 523

                                                                       
Query: 121 aaatgtattacagaaaagccatctcagtatttcagtaagaacaaggcttcaggagactac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaatgtattacagaaaagccatctcagtatttcagtaagaacaaggcttcaggagactac 463

                                                                       
Query: 181 agagccgcaagacattgtctttactttctgacaacacctttaaaaactgttttcatattt 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agagccacaagacattgtctttactttctgacaacacctttaaaaactgttttcatattt 403

                                                                       
Query: 241 gttatctcaactaaattagccttaagcttaccccttattttcacaggtaaaatcatcctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gttatctcaactaaattagccttaagcttaccccttattttcacaggtaaaatcatcctg 343

                                                                       
Query: 301 ggccaaagcatcatagtggcatctcattaatttcttctaagagctgtgcaaaaaggcttt 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 342 ggccaaagcatcatagtggcatctcattaatttcttctaagagccgtgcaaaaaggcttt 283

                                                                       
Query: 361 ttggttggcctgtaaacccaggagagaacagaggttcagtactcaggaaattgccccaca 420
           | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tcggttggcctgtaa-cccaggagagaacagaggttcagtactcaggaaattgccccaca 224

                                  
Query: 421 gtcatgccaggcatttgctaaga 443
           |||||||||||||||||||||||
Sbjct: 223 gtcatgccaggcatttgctaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 837
Length adjustment: 9
Effective length of query: 434
Effective length of database: 828
Effective search space:   359352
Effective search space used:   359352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)