Query= MSMg01no463_e02.b1 MSMg01no463_e02.b1 CHROMAT_FILE:
MSMg01no463_e02.b1 PHD_FILE: MSMg01no463_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:35 2005
(448 letters)
>mm_chr2_144445705_144446552
Length = 848
Score = 603 bits (312), Expect = e-177
Identities = 318/320 (99%)
Strand = Plus / Minus
Query: 129 tgacatcagcctctagggatggagacccacctgatcccaggctctgtcattcatgggtta 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tgacatcagcctctagggatggagacccacctgatcccaggctctgtcattcatgggtta 789
Query: 189 ccctgatacacctcagcttcctcatctgtaaaatgaaggtaatgccttgcctgataaggt 248
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 788 ccctgatacacctcagcttcctcatctgtaaattgaaggtaatgccttgcctgataaggt 729
Query: 249 cattgtggaaatgcaagcagattattaatgggaagcacttattcctcacagggctctaga 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cattgtggaaatgcaagcagattattaatgggaagcacttattcctcacagggctctaga 669
Query: 309 agatcgaaagcccctaataagagatgtattttagcatgctatgtactgacaataataaag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agatcgaaagcccctaataagagatgtattttagcatgctatgtactgacaataataaag 609
Query: 369 taggggcaacttaactagtttgccagtagggggtggggtgccctgttctatgtagatgcg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 taggggcaacttaactagtttgccagtagggggtggggtgccctgttctatgtagatgcg 549
Query: 429 gcaaaagagcttgaggtcac 448
| ||||||||||||||||||
Sbjct: 548 ggaaaagagcttgaggtcac 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_e02.g1 MSMg01no463_e02.g1 CHROMAT_FILE:
MSMg01no463_e02.g1 PHD_FILE: MSMg01no463_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:35 2005
(473 letters)
>mm_chr2_144264412_144265285
Length = 874
Score = 770 bits (398), Expect = 0.0
Identities = 428/438 (97%), Gaps = 4/438 (0%)
Strand = Plus / Plus
Query: 1 agccatgcctgcttgcaaaagatcaacacaatcaggattgctcattaataagttccctct 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccacgcctgcttgcaaaagatcaacacaatcaggattgctcattaataagttccctct 260
Query: 61 cagaaggatggggcaggaaaggccctgaaactttctcctgagtatccagccactcctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaaggatggggcaggaaaggccctgaaactttctcctgagtatccagccactcctccc 320
Query: 121 aaccagtcttaatgctgccttaattgcccatggcctttcggcctggaggggcagaggact 180
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aaccagtcttaatgctgctttaattgcccatggcctttcggcctggaggggcagagaact 380
Query: 181 aggggaaggggctccatctatacagccatgaccatggaggtcatcacc-agga-tgggta 238
|||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||
Sbjct: 381 aggggaaggggctccatctatacatccatgaccatggaggtcatcacccag-actgggta 439
Query: 239 cagatcttcctttggctgtgttaaggttgcctgtgctccttcctgtaacccccc-tacct 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 cagatcttcctttggctgtgttaaggttgcctgtgctccttcctgtaaccccccctacct 499
Query: 298 gtatgtcctgtaagtaagcctgattggttccccagggtgtactttgatggaattgaagct 357
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtatgtcctgtaagtaagcctggttggttccccagggtgtactttgatggaattgaagct 559
Query: 358 tgaattgtcactggaacagagtaaggagggcagatgttgtctagtctccgcccaggagaa 417
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 560 tgaattgtcactggaacagagtaaggagggcagatgttgtctagtctccacccaggagaa 619
Query: 418 tagactcttacaacacca 435
||||||||||||||||||
Sbjct: 620 tagactcttacaacacca 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 874
Length adjustment: 10
Effective length of query: 463
Effective length of database: 864
Effective search space: 400032
Effective search space used: 400032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
