Query= MSMg01no463_e04.b1 MSMg01no463_e04.b1 CHROMAT_FILE:
MSMg01no463_e04.b1 PHD_FILE: MSMg01no463_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:35 2005
(369 letters)
>mm_chr2_132392513_132393277
Length = 765
Score = 679 bits (351), Expect = 0.0
Identities = 363/369 (98%), Gaps = 4/369 (1%)
Strand = Plus / Plus
Query: 1 agaaatcccttctcaaaagaataaagacacttgccaccaagcctgataacctaagttcat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 agaaatcccttctcaaaagaataaagacacttgccaccaagccagataacctaagttcat 260
Query: 61 tctctaagactcacatggtagagaactactcccaagttgtctacacgcgccacggcatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctaagactcacatggtagagaactactcccaagttgtctacacgcgccacggcatgg 320
Query: 121 gcgaccttatacacatatgtacacatgaaaaattagtaagtacataaacaaatacaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgaccttatacacatatgtacacatgaaaaattagtaagtacataaacaaatacaactt 380
Query: 181 taaaagaaaactagagagtgaaagaaagatctcagcagtagaacattcctctggcatgaa 240
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 taaaagaaaactagagagtgaaaga----tctcagcagtagaacattcctctggcatgaa 436
Query: 241 caaaaagctgttagcttaagccccagtacttcccccaaatgaaaaataacttctcataca 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caaaaagctgtaagcttaagccccagtacttcccccaaatgaaaaataacttctcataca 496
Query: 301 catgtgcatgcatatgtctgcaatcctagtgcacagaaggctgaagcaaaagggccaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 catgtgcatgcatatgtctgcaatcctagtgcacagaaggctgaagcaaaagggccaagt 556
Query: 361 tcaagacca 369
|||||||||
Sbjct: 557 tcaagacca 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 765
Length adjustment: 9
Effective length of query: 360
Effective length of database: 756
Effective search space: 272160
Effective search space used: 272160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_e04.g1 MSMg01no463_e04.g1 CHROMAT_FILE:
MSMg01no463_e04.g1 PHD_FILE: MSMg01no463_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:36 2005
(473 letters)
>mm_chr2_132512350_132513223
Length = 874
Score = 878 bits (454), Expect = 0.0
Identities = 469/474 (98%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 1 caggacaaccatagctatgtagagagactatatatatatgcaaaccaaaaccataaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 caggacaaccatagctatgtagagagactatatatatatgcaaaccaaaaccataaaagc 615
Query: 61 cttaacaaaaccaaaataaataattgactggaactaatcctgatctctactaattccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cttaacaaaaccaaaataaataattgactggaactaatcctgatctctactaattccaga 555
Query: 121 gcgaggtaaaaagagcgcagtgggcggagcttggagcggaggggcggggcggggcaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gcgaggtaaaaagagcgcagtgggcggagcttggagcggaggggcggggcggggcaggtg 495
Query: 181 ccagggaaaccggcggaataaaccatccgctcct-cccctccctcctcgcttccccgctc 239
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 494 ccagggaaaccggcggaataaaccatccgctcctccccctccctcctcgcttccccgctc 435
Query: 240 ccttcccatctttctccagaacggcagaaaaaccggcagaggttctcagagccccgtgtc 299
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ccttcccaccgccctccagaacggcagaaaaaccggcagaggttctcagagccccgtgtc 375
Query: 300 actcaccggctgaccgcaagagcccggaaccggaagcgctggctccatctttgttatggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 actcaccggctgaccgcaagagcccggaaccggaagcgctggctccatctttgttatggg 315
Query: 360 aaaagcagagtttaaaaggaagttgttgaacccgtctttgctgaggcgagaaaaggtcaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aaaagcagagtttaaaaggaagttgttgaacccgtctttgctgaggcgagaaaaggtcaa 255
Query: 420 ggcaagtcagctgcggccatcttaactgagggcatttgcctgaactcctgcagc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggcaagtcagctgcggccatcttaactgagggcatttgcctgaactcctgcagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 874
Length adjustment: 10
Effective length of query: 463
Effective length of database: 864
Effective search space: 400032
Effective search space used: 400032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
