NTTTCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAACACC
GCGGAATTCCATAATTTCAACACTCTTGCTCAGGGTTTGTTTAATGACAG
AGAACAAGGAGGGAAACTAGATGCATCATGTGTTATCTTCCAAAGCGTCA
ACTTATATGTGACTTTTAGATGTTCCATTTGTCCATATTCCATTACCCAA
AGATCAGGGAACTATCTGGACCAGAAAGAGATAATGTGATCCCAGAATGG
TGTATACAGGATAAAATCCTTTTACAGGTCAGGAGTAGATAGATACATGT
CTGTGGTCCAGTGGAGTATGTTGTATCACTTTAGACAAAGCCTCTTTAAT
TCTTCATTTATAAACCAATGATTTGATTTTTCATATTTTTACATAGGAAA
CAAAACTAGAAAACTAATGTGACAACACATACAGTGATATTTCTGATCTT
TATACCTTCCATTATCTCTACTCCCCACAGAAACTAAAATAATTTTTATT
TTCCTGAGTTCCTTTAGTTAAACATTTTAAGTAAATCAGAAGGTATTACT
ACATAGATCATATACCCTTATATAAGGTTCCACAGCATTTTGATAATAAT
CACATTTATTCTCATCTTCTATGCTTAGAGGCGCTATTCTGTTTAATTTT
TCTTTTAAAAACTTAAAATATGTCCGTCATCATTCCATACAAATCCTGCT
TAAGCTCCACCAGTGTGTCTAACAAATAAACCTTTCTTN

TTTTTCCGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGCAGGGCAGTCTCTGGA
TGGCCTTTCCTTCAGTCTCTGCCCCATACTTTGTCTCTGTATCTCCTCCC
ATGGGTATTTTGTTTGCCCTTCTAAGAAGAACTGAAGTACCCACACTTTG
GTCTTCCTTCCTCCTGAGCTTCATGTGGTCTGTGAATTGTATCTTTCGTA
TTTCTGGCAAGGATGTAGAGAAAGAAAAACAGTCCTCTGTTGTTGGTGGG
ATTGAAAGCTGGTACAACCACTCTGGTATTTCAGTTTGGTAGTTCCTCAG
AAAATTGGACATAGTACTAACTGAGGATCCAGTAATATCACTCCTGGGCT
TATACCCAGAAGATGCTCTAAAATGTAATAAGGACACATGTTCTACTATG
TTCACATTAGCCTTATTTCTAACAGATAGAAGCTGGAAAGAACCCAGATG
TCCTTCAACAGAGGAATGAATACAGAAAATGTGATACATTTACACAATGG
AGTACTACTCAGCTATTAAAAACAATGAATCAATGAAATTTTTAGGCAAA
TGGATGGAACTATAAAATATCATCCTTAGTGAGGTAGCCCAATCACAAAC
GATCACACATTGTATGCACTCCCTGATAAATGGGTATTAACCTAGAACGT
TGATAGAGAAATTTTTAAAAACCCTAATTTTGAGAGGGAACAAGG

Query= MSMg01no463_l10.b1 MSMg01no463_l10.b1 CHROMAT_FILE:
MSMg01no463_l10.b1 PHD_FILE: MSMg01no463_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:14 2005
         (461 letters)



>mm_chr2_54067031_54067887
          Length = 857

 Score =  810 bits (419), Expect = 0.0
 Identities = 449/461 (97%), Gaps = 4/461 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgctcagggtttgtttaatgacagagaacaaggagggaaactagatgcatcatgtgtta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ttgctcagggtttgtttaatgacagagaacaaggagggaaactagatgcatcatgtgtta 598

                                                                       
Query: 61  tcttccaaagcgtcaacttatatgtgacttttagatgttccatttgtccatattccatta 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tcttccaaagcgtccacttatatgtgacttttagatgttccatttgtccatattccatta 538

                                                                       
Query: 121 cccaaagatcagggaactatctggaccagaaagagataatgtgatcccagaatggtgtat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cccaaagatcagggaactatctggaccagaaagagataatgtgatcccagaatggtgtat 478

                                                                       
Query: 181 acaggataaaatccttttacaggtcaggagtagatagatacatgtctgtggtccagtgga 240
           | |||||||||||||||||||||||||||    |||||||||||||||||||||||||||
Sbjct: 477 agaggataaaatccttttacaggtcagga----atagatacatgtctgtggtccagtgga 422

                                                                       
Query: 241 gtatgttgtatcactttagacaaagcctctttaattcttcatttataaaccaatgatttg 300
           ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 421 gtatgatgtaacactttagacaaagactctttaattcttcatttataaaccaatgatttg 362

                                                                       
Query: 301 atttttcatatttttacataggaaacaaaactagaaaactaatgtgacaacacatacagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttttcatatttttacataggaaacaaaactagaaaactaatgtgacaacacatacagt 302

                                                                       
Query: 361 gatatttctgatctttataccttccattatctctactccccacagaaactaaaataattt 420
           |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 gatattactgatctttataccttccattatctctactccccacagaaattaaaataattt 242

                                                    
Query: 421 ttattttcctgagttcctttagttaaacattttaagtaaat 461
           ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 ttatttttctgagttcctttagttaaacattttaagtaaat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 857
Length adjustment: 10
Effective length of query: 451
Effective length of database: 847
Effective search space:   381997
Effective search space used:   381997
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)