TTTTAATACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGG
ATCCGCGGAATTCCATCACTACTTACCACCCATTAGTTAATCTCAAAGGA
ATATGTAAGAAATGCCTTGTGGGACTACTGAGCAGAATTAAAACAAAATA
TGTATCTCCTGGGTGACTTATTAGGTGGAGTATATCAGACGAAGAAAATG
TAAGAGTTTAACCATACAGCCCAGGATTTGACAGGATGCTCGAACTTTAA
TCCAGTGTGAAGACATTCATACAAGTTAGCAAAAATAGAATTGCAGGATC
CATACCTGCTTTCTTCCCAACCACAGGCGCTGTCTTTTTGGCAGCGATGG
GAGTGGGTGCCGGCTCGATGGGTGGAGCTTTCATGGTTTTCACCTCTGTG
GAGAGAAGATGCCCACTGTATTAAGGCAGCCACTTGGCACCTCCTAGGAT
AACTATGTTTGGTGGCCTATTGGCCTTTCATGATGTAATGCTGAGGTCTC
CAAAAACCTAGTTTTTCTAAGAGTGCTATCTAATAAGCATATTGAGATAT
CAGAAATCACTTTGACGCACAATGATTTTCATGTTGTTTAATGTATATCA
CTTTAATCTAAAATAATCCTTTTTTTTTTCATTTGCTACATGCCATTTAT
GTGGATCTTGAAGAACATGTCAGGAGTAAGCGTGTTTACCTGGCTCAGGC
TTTGGCTTTGGTTCAGGTCCAGGGAGAGTTATG

CAAATGCTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGCTTTGCAATGTGA
GGCAGGTGCTTTATTGTTGAGCTATCTCTGTAAAATCCATTTTGGATATT
GGTGAATCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCTCTCCCTCTATCCT
CTCTCCCTCTCTCCCTCTCCCTCTCCCTCTCTCTCCTCCCCCAGCCCTCC
CTGCCCCCAACCCCTGTGTGTGTGTGTGTGTGTGTGTGTATTGTAGTAGG
GGTTCTTGTCTGTGTGAATTTTTTTCTCCCCACNACGGCAGGGGGGGGAC
GAGGCTATCCAATCAGAGAGTAGTTCACCCCTCATTTTTTCTCCATCTTG
ATTATATGGTAGCCATTAGTGTTCGAAACATAGTCACGGTGCGGTATTTA
GTATTGTTCGTGGTTTTTATTTATATTCTTAGCGCTGTCGCGTTCACAAC
TACTCGTGTGCTCAAATATGGGTATTTTGTGTGGTTTTGTGGTTATTCGT
TTCTTTGTGCTTCTATAAAACTTGGAACATTTCATTATTTGCTATAAAAA
TTAGAATAAAGACAAACACTGTCTTTTTTCGTCGTGTTTTCGTCTTGCTG
CTTTTGCTGCTAGATAGTGTGAGGCACTCTTCGATACTGGACTGTTGTCT
TTCC

Query= MSMg01no463_p24.b1 MSMg01no463_p24.b1 CHROMAT_FILE:
MSMg01no463_p24.b1 PHD_FILE: MSMg01no463_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:37 2005
         (639 letters)



>mm_chr2_76653791_76654829
          Length = 1039

 Score = 1183 bits (612), Expect = 0.0
 Identities = 632/644 (98%), Gaps = 10/644 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattagttaatctcaaaggaatatgtaagaaatgccttgtgggactactgagcagaatta 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cattagttaatctcaaaggaatatgtaagaaatgccttgtgggactacagagcagaatta 260

                                                                       
Query: 61  aaacaaaatatgtatctcctgggtgacttattaggtggagtatatcagacgaagaaaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacaaaatatgtatctcctgggtgacttattaggtggagtatatcagacgaagaaaatg 320

                                                                       
Query: 121 taagagtttaaccatacagcccaggatttgacaggatgctcgaactttaatccagtgtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagagtttaaccatacagcccaggatttgacaggatgctcgaactttaatccagtgtga 380

                                                                       
Query: 181 agacattcatacaagttagcaaaaatagaattgcaggatccatacctgctttcttcccaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacattcatacaagttagcaaaaatagaattgcaggatccatacctgctttcttcccaa 440

                                                                       
Query: 241 ccacaggcgctgtcttttt-----ggcagcgatgggagtgggtgccggctcgatgggtgg 295
           ||||||||||||||          ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccacaggcgctgtc-----acgggggcagcgatgggagtgggtgccggctcgatgggtgg 495

                                                                       
Query: 296 agctttcatggttttcacctctgtggagagaagatgcccactgtattaaggcagccactt 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agctttcatggttttcacctctgtggagagaagatgcccactgtattaaggcagccactt 555

                                                                       
Query: 356 ggcacctcctaggataactatgtttggtggcctattggcctttcatgatgtaatgctgag 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ggcacctcctaggataactatgtttggtggcctattggcctttcatgatgtaatgctgag 615

                                                                       
Query: 416 gtctccaaaaacctagtttttctaagagtgctatctaataagcatattgagatatcagaa 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gtctccaaaaacctagtttttctaagagtgctatctaataagcatattgagatatcagaa 675

                                                                       
Query: 476 atcactttgacgcacaatgattttcatgttgtttaatgtatatcactttaatctaaaata 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 atcactttgacgcacaatgattttcatgttgtttaatgtatatcactttaatctaaaata 735

                                                                       
Query: 536 atccttttttttttcatttgctacatgccatttatgtggatcttgaagaacatgtcagga 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 atccttttttttttcatttgctacatgccatttatgtggatcttgaagaacatgtcagga 795

                                                       
Query: 596 gtaagcgtgtttacctggctcaggctttggctttggttcaggtc 639
           |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 796 gtaagcttgtttacctggctcaggctttggctttggttcaggtc 839


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)