Query= MSMg01no464_d23.b1 MSMg01no464_d23.b1 CHROMAT_FILE:
MSMg01no464_d23.b1 PHD_FILE: MSMg01no464_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:56 2005
(694 letters)
>mm_chr2_89576859_89577952
Length = 1094
Score = 1309 bits (677), Expect = 0.0
Identities = 687/691 (99%), Gaps = 2/691 (0%)
Strand = Plus / Plus
Query: 4 gaattcattaaataattttcaaacaacatgtatgagtttacccacaaaaataccttgtat 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcattaaataattttgaaacaacatgtatgagtttacccacaaaaataccttgtat 263
Query: 64 caagagaagcacacatcttcataaaaaaactaaaataccaaaaataattggatgaattga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caagagaagcacacatcttcataaaaaaactaaaataccaaaaataattggatgaattga 323
Query: 124 tcagtccagagacagtattagtttttgctaaagtttgatcgtgccccctgatctagtgct 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagtccagagacagtattagtttttgctaaagtttgatcgtgccccctgatctagtgct 383
Query: 184 cttctcaattcaaggcacttttctccacactattctccctgcttttactggctgatttca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttctcaattcaaggcacttttctccacactattctccctgcttttactggctgatttca 443
Query: 244 aagcatggtttcaatcagagttccatacttttgtttatttctgagaggctgcttccttca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagcatggtttcaatcagagttccatacttttgtttatttctgagaggctgcttccttca 503
Query: 304 tctgtccaacaaaattcctgacaactaaaataaaaataccatgtttgaaaaaaaaaaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctgtccaacaaaattcctgacaactaaaataaaaataccatgtttgaaaaaaaaaaaaa 563
Query: 364 aagaattctgcactaaagccatctcgctctgggatttttgtgcttgggggggattttaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 --gaattctgcactaaagccatctcgctctgggatttttgtgcttgggggggattttaat 621
Query: 424 gatttcttctatttccttaggggatatgggcctgtttagatagtttacctgctcctgatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gatttcttctatttccttaggggatatgggcctgtttagatagtttacctgctcctgatt 681
Query: 484 taactttggtatatggtatctgtctagaaaaccatctatttcatgaagagtttccagttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 taactttggtatatggtatctgtctagaaaaccatctatttcatgaagagtttccagttt 741
Query: 544 tgttgtgtatagacttttatagcaggatctgatcatttttgaatttcctccatttctgtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgttgtgtatagacttttatagcaggatctgatcatttttgaatttcctccatttctgtt 801
Query: 604 gttatgtctccattttcattttttattttgttagtttggatactgcctcttggccctttg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gttatgtctccattttcattttttattttgttagtttggatactgcctcttggccctttg 861
Query: 664 gttagtacggctttgagtttatctattttgt 694
|||||||||||||||||||||||||||||||
Sbjct: 862 gttagtacggctttgagtttatctattttgt 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_d23.g1 MSMg01no464_d23.g1 CHROMAT_FILE:
MSMg01no464_d23.g1 PHD_FILE: MSMg01no464_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:56 2005
(450 letters)
>mm_chr2_89593227_89594072
Length = 846
Score = 772 bits (399), Expect = 0.0
Identities = 430/450 (95%), Gaps = 17/450 (3%)
Strand = Plus / Minus
Query: 1 ctatgtggggactctcagcatctttatcctaaatgctaaaaataattaagactaaattaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 725 ctatgtggggactctcagcatctttatcctaaatgctaaa-------------aaattaa 679
Query: 61 atcttatttaatcttaagattaaaaatatattcttactattaaatctctatctgtttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 atcttatttaatcttaagattaaaaatatattcttactattaaatctctatctgtttttc 619
Query: 121 cctctgtctctctgcatagtcatttctgagaattctggaaaaaatattatttctgcagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cctctgtctctctgcatagtcatttctgagaattctggaaaaaatattatttctgcagac 559
Query: 181 gcagggtttcttaggagtcatggtttagttcaggtaaagtaaaaatagttttgaaaatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcagggtttcttaggagtcatggtttagttcaggtaaagtaaaaatagttttgaaaatcc 499
Query: 241 tgctagtagatatgagtatgttactaattagcatataagcaagaatgagatggaactgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgctagtagatatgagtatgttactaattagcatataagcaagaatgagatggaactgta 439
Query: 301 cctagtaaaatatgacagcagaagatgaagcaattcaaacaggttacaggtaatagttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cctagtaaaatatgacagcagaagatgaagcaattcaaacaggttacaggtaatagtt-- 381
Query: 361 gtaatggataatatttgaatgtttgatgtaattcaaaaatctacttactcatttaaagtc 420
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 -t-ctggataatatttgaatgtttgatgtaattcaaaaatctacttacttatttaaagtc 323
Query: 421 agacacatacaatagctaanattatcttgt 450
||||||||||||||||||| ||||||||||
Sbjct: 322 agacacatacaatagctaaaattatcttgt 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 846
Length adjustment: 10
Effective length of query: 440
Effective length of database: 836
Effective search space: 367840
Effective search space used: 367840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
