Query= MSMg01no464_f07.b1 MSMg01no464_f07.b1 CHROMAT_FILE:
MSMg01no464_f07.b1 PHD_FILE: MSMg01no464_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:03 2005
(542 letters)
>mm_chr2_42051306_42052247
Length = 942
Score = 1025 bits (530), Expect = 0.0
Identities = 537/540 (99%)
Strand = Plus / Minus
Query: 3 gatctgnacttctgctgatttgaagggaataggtgctgatatgctattatagatcattct 62
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gatctgtacttctgctgatttgaagggaataggtgctgatatgctattatagatcattct 683
Query: 63 cgccagaattcaccccattactgagtctgaagctgcctgtgcggtactcatcacacatgg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cgccagaattcaccccattactgagtctgaagctgcctgtgcggtactcatcacacatgg 623
Query: 123 caacacctcaccattagccgtgaaatccatattcatctccttttctgcatgctgacctca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 caacacctcaccattagccgtgaaatccatattcatctccttttctgcatgctgacctca 563
Query: 183 agatgtcttgaacagccatgcctccctgaatctccaagagagaaacatccctacactttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agatgtcttgaacagccatgcctccctgaatctccaagagagaaacatccctacactttt 503
Query: 243 tgtattctgaacactttttagggttgtatcatgtcacatatgaaacacacagagtctgaa 302
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tggattctgaacactttttagggttgtatcatgtcacatatgaaacacacagagtctgaa 443
Query: 303 gacccaaactttctattcatatggaaaaggagaagaaaaaaagcaaagttaacatactct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gacccaaactttctattcatatggaaaaggagaagaaaaaaagcaaagttaacatactct 383
Query: 363 aataactgattttgtcttcagagtgtaactgtagtcagacttaaatatttctacacaaaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aataactgattttgtcttcagagtgtaactgtagtcagacttaaatatttctacacaaaa 323
Query: 423 tcactcaaaaaattatgttcaaattgtctagcactattgccaggcatgcagaagcaattc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcactcaaaaaattatgttcaaattgtctagcactattgccaggcatgcagaagcaattc 263
Query: 483 tattgttttatttcccattatatttcaatcaactgatgtatgtnaaaactgctgctctcc 542
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 262 tattgttttatttcccattatatttcaatcaactgatgtatgtaaaaactgctgctctcc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_f07.g1 MSMg01no464_f07.g1 CHROMAT_FILE:
MSMg01no464_f07.g1 PHD_FILE: MSMg01no464_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:04 2005
(467 letters)
>mm_chr2_41893993_41894858
Length = 866
Score = 841 bits (435), Expect = 0.0
Identities = 459/467 (98%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 1 cagaaacttcccagggagacattttcaaatatcatagaacagtcacagagtgttaatgat 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 cagaaacttcccagggagacattttcaaatatcatcgaacagtcacagagtgttaatgat 260
Query: 61 attaacattttctgagatggaaacttctgtgaaattctttggatcttattattaaagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attaacattttctgagatggaaacttctgtgaaattctttggatcttattattaaagata 320
Query: 121 atcatggagaatgcaaaaaactaaccacttgtcaatttctgattatctacatatttatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcatggagaatgcaaaaaactaaccacttgtcaatttctgattatctacatatttatac 380
Query: 181 tactatattgtatttgtcagagtaataccatatgcttccttttccccacacaaatctttt 240
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tactatattgtgtttgttagagtaataccatatgcttccttttccccacacaaatccttt 440
Query: 241 gaggtaactgcataatagaaatgataaaaacgattgtaaatatcaaatcaagaaatttac 300
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 gaggtaactgcataata-aaatgataaaaacgattataaatatcaaatcaagaaatttac 499
Query: 301 ctctcttataaataggagcactagatagaatgtttttcagtctgcttctatataaaactt 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 ctctcttataaataggagcactagatagaatgtttttcagtccgcttctatataaaactt 559
Query: 361 gtaacttactttagcgacatttactttgcacattcccagccatttgcatactaacagtaa 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtaacttcctttagcgacatttactttgcacattcccagccatttgcatactaacagtaa 619
Query: 421 gtaatgatcaacaattcatttagttcaatattaaatgtttaacttca 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtaatgatcaacaattcatttagttcaatattaaatgtttaacttca 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 866
Length adjustment: 10
Effective length of query: 457
Effective length of database: 856
Effective search space: 391192
Effective search space used: 391192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
