GGGCCGCTAAACGACTCACATATTCAGAGAACCGCGGAATTCTATATCTT
TCCCAACCACTGTTTCAAGAAACTTCTGATACTTGGCAGTGCAAGCCACA
GCACATGGGGCCAAGTGAGGATTCATCCCTCCCCAACACACGCTGATCCA
AGTGAGGAAAACTTCATGTCCCCCTACAATGTATCAGCCACGCTCTCGTC
TGAATCCACAAACACTCATTATTTTGACCTCTCTCTTCTTCAACAGGGCA
ATTTTTCTAATCCTGGATCCAAAATTGCTGCTGTAGTAAATTATGCTAAC
CCTTGAAGATCAAGATAAATGTGGTGTTTGAATATGTGCTTAGCCCAAAG
AGCAGCACTATTAAGAGGTGTGGCCTTGTCAGAGTAGGTGTGGCCTTGTT
GAAGGAAATGTGACACTTTGTGGGTGGGCTTTGAGAACCTTCTTCTAGCT
GCCTGAAAGACAGTCCTCTCCTGATTTCCTTCAGATTAAGATTTAGAACT
CTTGGCTCCTTCTCCAGCACAGTGTCTGCCCATACATTGCCATGCCTCCT
ACCATGATGAAAACTGGTGAATTCCTGAACCTGTAAGCCAACCCCAATTA
AATGTTTTCCCTTAAAAAATTGGCCTTGGTCCTGGGGCCCCCTCCCACAA
ATGGAAACCCCATCTATAGGATTTTGAAAAACCTCTCTCGTTCGTCTCCT
GCTCAAAATCTCCCCTTTCTCTTTAAACCCCCCCCCAGGGAAAATTGTTT
CCGGCCTTTCCCGCCCCCAATCTCTTTATAA

TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACT
TGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACA
ACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTC
AGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCC
ATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGG
CGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATACC
TCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACAT
GCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAA
GAACCTAGATGCCCCTCAACAGAGGAATGGATACCGACAATGTGGGACAT
CTACACAATGCAGCACTACTCCGCCATTAAAAAGAAAGAATTTATGAAAT
TCCTAGCCCAAGGATGGGACCTGGAGGGTTCCCCCTGATGGGGGGAACCC
TTTCCCATTAAACCCCCCTAATTGTTCTCCCGTTATTGGGCTTTTTTCCT
CTTTCAGGACTCTACATATAATAATAATTTGCCCACCTCCATACTTATAC
AATGAATATTGTTTTTTCTTTTCTTTCCCTTTTTTCTGTTCTTTCAACCC
CCTCGTGTGTTTCTTCT

Query= MSMg01no465_d22.b1 MSMg01no465_d22.b1 CHROMAT_FILE:
MSMg01no465_d22.b1 PHD_FILE: MSMg01no465_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:17 2005
         (452 letters)



>mm_chr2_159169404_159170256
          Length = 853

 Score =  787 bits (407), Expect = 0.0
 Identities = 440/451 (97%), Gaps = 3/451 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattctatatctttccca-accactgtttcaagaaacttctgatacttggcagtgcaag 62
           ||||||||||||| ||  | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gaattctatatctctctaataccactgtttcaagaaacttctgatacttggcagtgcaag 428

                                                                       
Query: 63  ccacagcacatggggccaagtgaggattcatccctccccaacacacgctgatccaagtga 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccacagcacatggggccaagtgaggattcatccctccccaacacacgctgatccaagtga 368

                                                                       
Query: 123 ggaaaacttcat-gtccccctacaatgtatcagccacgctctcgtctgaatccacaaaca 181
           |||||||||| | |||||||||||| || ||||||| |||||||||||||||||||||||
Sbjct: 367 ggaaaacttc-tcgtccccctacaacgtctcagccaagctctcgtctgaatccacaaaca 309

                                                                       
Query: 182 ctcattattttgacctctctcttcttcaacagggcaatttttctaatcctggatccaaaa 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctcattattttgacctctctcttcttcaacagggcaatttttctaatcctggatccaaaa 249

                                                                       
Query: 242 ttgctgctgtagtaaattatgctaacccttgaagatcaagataaatgtggtgtttgaata 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttgctgctgtagtaaattatgctaacccttgaagatcaagataaatgtggtgtttgaata 189

                                                                       
Query: 302 tgtgcttagcccaaagagcagcactattaagaggtgtggccttgtcagagtaggtgtggc 361
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 188 tatgcttagcccaaagagcagcactattaagaggtgtggccttgtcagagtaggtgtggt 129

                                                                       
Query: 362 cttgttgaaggaaatgtgacactttgtgggtgggctttgagaaccttcttctagctgcct 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 cttgttgaaggaaatgtgacactttgtgggtgggctttgagaaccttcttctagctgcct 69

                                          
Query: 422 gaaagacagtcctctcctgatttccttcaga 452
           |||||||||||||||||||||||||||||||
Sbjct: 68  gaaagacagtcctctcctgatttccttcaga 38


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space:   372606
Effective search space used:   372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)