Query= MSMg01no466_p16.b1 MSMg01no466_p16.b1 CHROMAT_FILE:
MSMg01no466_p16.b1 PHD_FILE: MSMg01no466_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:41 2005
(352 letters)
>mm_chr2_3270601_3271352
Length = 752
Score = 634 bits (328), Expect = 0.0
Identities = 346/352 (98%)
Strand = Plus / Minus
Query: 1 ataaaaaggggtcttgctatgtagcctagactggcctcaaactcaagatcttcttctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ataaaaaggggtcttgctatgtagcctagactggcctcaaactcaagatcttcttctttc 596
Query: 61 agtctcccaagtacttgggtcatagggatacagtgctgtgcccacctaagctctgtctct 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 595 agtctcccaagtacttgggtcatagggatacactgctgtgcccacctaagctctgtctct 536
Query: 121 ttaaagatggggtagccatataaattatttaaagctttacttaaaaacaaaaacaaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttaaagatggggtagccatataaattatttaaagctttacttaaaaacaaaaacaaaaac 476
Query: 181 gaaagatgagctagcatccaaacattactgataactaaatgctatctatggtcagttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 475 gaaagatgagctagcatccaaacattactgataactaaatgctatctatggtcaggcgtg 416
Query: 241 attagttacttgcaagatagtcttcctaggtggccagatcgcttccaatttgtggtcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 attagttacttgcaagatagtcttcctaggtggccagatcgcttccaatttgtggtcctc 356
Query: 301 ctgtctcagattcccatgtttgggtatcacaggagtttcaccatacttctga 352
|||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctgtctcagattcctgtgtttgggtatcacaggagtttcaccatacttctga 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_p16.g1 MSMg01no466_p16.g1 CHROMAT_FILE:
MSMg01no466_p16.g1 PHD_FILE: MSMg01no466_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:42:42 2005
(409 letters)
>mm_chr2_3097445_3098253
Length = 809
Score = 746 bits (386), Expect = 0.0
Identities = 401/406 (98%)
Strand = Plus / Plus
Query: 1 ctttcctcatccttagcaataactcctagaagctgtgttaggttttctcttcttccctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttcctcatccttagcaataactcctagaagctgtgttaggttttctcttcttccctgg 260
Query: 61 gaggcttgcagactaaagaaacggatctcagcaaacaagtcagagatccacgaagtcctc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gaggcttgcagactaaagaaacggatctcagcaaacaagtcagagatccacgaactcctc 320
Query: 121 cacgtgagccgttctgtttactagggaggattctcctccatctctgtcaacggcaggtct 180
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 321 cacgtgagccgttctgtttactaaggaggattctcctccatctctgtcaatggcaggtct 380
Query: 181 tcccattgctctggcaaagaaacggtggtccaggactactgcactgctctctgaccaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccattgctctggcaaagaaacggtggtccaggactactgcactgctctctgaccaggt 440
Query: 241 taattggcctcctcaaaaacacccaccacattgctagtactgcatcttaaaatgcatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taattggcctcctcaaaaacacccaccacattgctagtactgcatcttaaaatgcatgtg 500
Query: 301 ccctgcaatccctgcaccctggagccattagcactccttcatgcgcagaagagcagctct 360
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ccctgcaatccctgcaccctagagccattagcattccttcatgcgcagaagagcagctct 560
Query: 361 tgaggccctgaggagctgttaagttaatcattgctgggggagaaag 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaggccctgaggagctgttaagttaatcattgctgggggagaaag 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
