Query= MSMg01no467_i01.b1 MSMg01no467_i01.b1 CHROMAT_FILE:
MSMg01no467_i01.b1 PHD_FILE: MSMg01no467_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:24 2005
(414 letters)
>mm_chr2_126628366_126629179
Length = 814
Score = 760 bits (393), Expect = 0.0
Identities = 405/409 (99%)
Strand = Plus / Minus
Query: 6 ggaattcactctgtataccaggctggcctcgaactcagaaatccacctgcctctgcctcc 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ggaattcactctgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctcc 525
Query: 66 cgagtcctgggattaaaggtgtccaccaccacgccctgcttggctgcagcatcttaatgc 125
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cgagtcctgggattaaaggcgtccaccaccacgccctgcttggctgcagcatcttaatgc 465
Query: 126 ttgtcttttcaacactttttttgtatttggtgtgactttaatgtttctgcttatattttg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttgtcttttcaacactttttttgtatttggtgtgactttaatgtttctgcttatattttg 405
Query: 186 gtattctttttgcaagaagcacaaattacttgtataatcagagacatgctgggagactaa 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gtattctttttgcaagaagcacaaattacttgtataatcagagacatgctgggagactaa 345
Query: 246 taatgtcatcttaaagaatctgaagaactataaattctggaggctggggagatgggtcat 305
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 344 taatatcatcttaaagaatctgaagaactagaaattctggaggctggggagatgggtcat 285
Query: 306 ttaggtaaagtcctgatgcaagcctcaggacctgggttcggatcaccagtccccatagaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttaggtaaagtcctgatgcaagcctcaggacctgggttcggatcaccagtccccatagaa 225
Query: 366 aagatagaggaagacacccacatgggtgctcagaaagacacacacacac 414
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aagatagaggaagacacccacatgggtgctcagaaagacacacacacac 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_i01.g1 MSMg01no467_i01.g1 CHROMAT_FILE:
MSMg01no467_i01.g1 PHD_FILE: MSMg01no467_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:24 2005
(458 letters)
>mm_chr2_126463006_126463864
Length = 859
Score = 804 bits (416), Expect = 0.0
Identities = 443/456 (97%), Gaps = 9/456 (1%)
Strand = Plus / Plus
Query: 4 tttcaggctatccaatgaccctggcctctgcaggcaccaggaatacacatgatacacata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tttcaggctatccaatgaccctggcctctgcaggcaccaggaatacacatgatacacata 271
Query: 64 catacatacacacatacacacatacatacatacatacatacatacatacatacatacata 123
||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 272 catacatacacac--acacac------acatacatacatacatacatacatacatacata 323
Query: 124 cgtgcaagcaaaggactcatgcacataaattaaaattaattttaaaaaagaaaaaagtga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cgtgcaagcaaaggactcatgcacataaattaaaattaattttaaaaaagaaaaaagtga 383
Query: 184 aaacaagacagagagggctgaggcacctaacatcaaccactggcctcctcatgcatgcac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaacaagacagagagggctgaggcacctaacatcaaccactggcctcctcatgcatgcac 443
Query: 244 actctaggtattaagggaggatataaatgagatgctgcttagtgaatgagttagtgtata 303
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acacaaggtattaagggaggatataaatgagatgctgcttagtgaatgagttagtgtata 503
Query: 304 aattagagctttaatgttctgtgggtgtcactttaaattctgagaaataaaacatcacac 363
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 aattagagctttaatgttctgtaggtgtcactttaaattctgagaaataaaacatcacac 563
Query: 364 tcagtagttaaaacttagaattttactagacatcctggttaaagcattagccatagattt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcagtagttaaaacttagaattttactagacatcctggttaaagcattagccatagattt 623
Query: 424 cttttgtgtttgttctttgtgcattcttttt-ttgt 458
|||| |||||||||||||||||||||||||| ||||
Sbjct: 624 ctttagtgtttgttctttgtgcattctttttgttgt 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 859
Length adjustment: 10
Effective length of query: 448
Effective length of database: 849
Effective search space: 380352
Effective search space used: 380352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
