Query= MSMg01no467_n17.b1 MSMg01no467_n17.b1 CHROMAT_FILE:
MSMg01no467_n17.b1 PHD_FILE: MSMg01no467_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:51 2005
(521 letters)
>mm_chr2_134095761_134096681
Length = 921
Score = 826 bits (427), Expect = 0.0
Identities = 445/451 (98%)
Strand = Plus / Minus
Query: 71 atgtcctatatagattgccaccagaaggtatggcccagattaaaggtcagttttccctcc 130
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 921 atgtcctatatagattgccaccagaaggtatggcccagattaaaggtcaattttccctcc 862
Query: 131 tcaaaaggtctgaattaaaagtgattgtctccacttaaaattatttaattaagaaaaatc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tcaaaaggtctgaattaaaagtgattgtctccacttaaaattatttaattaagaaaaatc 802
Query: 191 actgacaggagaacctaccatttgtattttatttaatttcagaagtgtattcaagttgtc 250
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 801 actgacaggagaacctaccatttgtattttatttaatttcagaagtgtattcaagttgac 742
Query: 251 aataaagaatagccactatagttgcctcttattagtctatttagtatttatttctccaca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aataaagaatagccactatagttgcctcttattagtctatttagtatttatttctccaca 682
Query: 311 ctcaaaaatacttcacatttcaggttatagttttgtaaacacagtatcaacttatttatt 370
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 ctcaaaaatacttcacatttcaggttatagttttgtaaacacagcatcaacttatttatt 622
Query: 371 tagtaatagctttaaatatccatcatcataaacactttatattttagcttacaactcaat 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tagtaatagctttaaatatccatcatcataaacactttatattttagcttacaactcaat 562
Query: 431 atatactatttattattttattttccgtatatctgtttgttaaattttatagtgcttgtt 490
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 ctatactatttattattttattttccatatatctgtttgttaaattttatagtgcttgtt 502
Query: 491 tcacaacatatgtattattcaatagtatagt 521
| |||||||||||||||||||||||||||||
Sbjct: 501 ttacaacatatgtattattcaatagtatagt 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_n17.g1 MSMg01no467_n17.g1 CHROMAT_FILE:
MSMg01no467_n17.g1 PHD_FILE: MSMg01no467_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:51 2005
(565 letters)
>mm_chr2_133910808_133911772
Length = 965
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%)
Strand = Plus / Plus
Query: 1 acctggattaacatgtaagccctccactgaactatggcagggaagattcatgttaaattt 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 acctggattaacatgtaagccctccactgaactatgacagggaagattcatgttaaattt 260
Query: 61 aacaccttttgtggtgctatccactgctccaacaggcattcagaaacagatgttcctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaccttttgtggtgctatccactgctccaacaggcattcagaaacagatgttcctagc 320
Query: 121 tgtgcatcagtcatccccctagggagtaacacagactcacactgtaggttcccaagcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcatcagtcatccccctagggagtaacacagactcacactgtaggttcccaagcaaa 380
Query: 181 taaaccttcctggctctaggtcagacgtcaccttttgaaagcatgaaagaggtcagtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 taaaccttcctggctctaggtcagacgtcaccttttgaaagcatgaaagagatcagtgga 440
Query: 241 aacatctctgtgtagcagagaagaggggaagagtggagagaagaaaggagaggcagagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacatctctgtgtagcagagaagaggggaagagtggagagaagaaaggagaggcagagaa 500
Query: 301 agatgggagg 310
||||||||||
Sbjct: 501 agatgggagg 510
Score = 143 bits (74), Expect = 3e-38
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 467 tcagtggaaacatgtctgtgtagcagagaagaggggaagagtggagagaagaaaggagag 526
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcagtggaaacatctctgtgtagcagagaagaggggaagagtggagagaagaaaggagag 492
Query: 527 gcagagaaagatgggagg 544
||||||||||||||||||
Sbjct: 493 gcagagaaagatgggagg 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 2
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
