Query= MSMg01no468_f12.b1 MSMg01no468_f12.b1 CHROMAT_FILE:
MSMg01no468_f12.b1 PHD_FILE: MSMg01no468_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:31 2005
(501 letters)
>mm_chr2_127525023_127525926
Length = 904
Score = 920 bits (476), Expect = 0.0
Identities = 495/504 (98%), Gaps = 7/504 (1%)
Strand = Plus / Plus
Query: 3 ggaattctgggaaattaca---gacacagggactacagatttgtggaagggccatcacct 59
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctgggaac--acaaaagacacagggactacagatttgtggaagggccatcacct 260
Query: 60 aggtaggtttttttttt--aattgccacttcagagtacaccagggaattgtggtcacaat 117
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtaggttttttttttttaattgccacttcagagtacaccagggaattgtggtcacaat 320
Query: 118 tgttgtttttgcctttgcaggtgaggaccctaggcctgataacaagttcctgttgatccc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgtttttgcctttgcaggtgaggaccctaggcctgataacaagttcctgttgatccc 380
Query: 178 tgtccaggagtatggtcccaactcaatgaagaaatcttcatgcaccgggtttctgacccc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtccaggagtatggtcccaactcaatgaagaaatcttcatgcaccgggtttctgacccc 440
Query: 238 aggctgatccatgtatgcaaatgtgactctctgagggcttgttcctcctcctcgtcactt 297
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 aggctgatccatgtatgcaaatgtgactctctgagggcttgtccctcctcctcgtcactt 500
Query: 298 acgaaaaccataagtcttgtgtctctggacagagtagatctaatccagattacgctgttc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgaaaaccataagtcttgtgtctctggacagagtagatctaatccagattacgctgttc 560
Query: 358 ctcttgcatgtggttctcagcacacctgatggctagtgctctactcctgggtcatgaaca 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcttgcatgtggttctcagcacacctgatggctagtgctctactcctgggtcatgaaca 620
Query: 418 tttcccagggcttttacagttttcctcagcgttatcattggctggtcacccagtctctga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttcccagggcttttacagttttcctcagcgttatcattggctggtcacccagtctctga 680
Query: 478 aggacagatgataggtccatagat 501
||||||||||||||||||||||||
Sbjct: 681 aggacagatgataggtccatagat 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 904
Length adjustment: 10
Effective length of query: 491
Effective length of database: 894
Effective search space: 438954
Effective search space used: 438954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_f12.g1 MSMg01no468_f12.g1 CHROMAT_FILE:
MSMg01no468_f12.g1 PHD_FILE: MSMg01no468_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:31 2005
(506 letters)
>mm_chr2_127612678_127613578
Length = 901
Score = 199 bits (103), Expect = 3e-55
Identities = 110/115 (95%), Gaps = 5/115 (4%)
Strand = Plus / Minus
Query: 1 ctattactcttaagcatagccacagggaaaattatgtaattataatctcaaaaaaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 310 ctattactcttaagcatagccacagggaaaattatgtaattataatctc-----aaaaaa 256
Query: 61 aaagaggtaacaaatagccgttactggattgttcatttgtttttctgaaattctt 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaagaggtaacaaatagccgttactggattgttcatttgtttttctgaaattctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 901
Length adjustment: 10
Effective length of query: 496
Effective length of database: 891
Effective search space: 441936
Effective search space used: 441936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
