NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGCATCCGC
GGAATTCATCTGAAATCCCGACACTGACATCCAGCAGAACACGACTAGTT
GCTGTATGTACAATTTGGCTAGGAGCTATCCATAAGATTCTGGGAAGACG
GACCTTTTCCAGAATCCAAGAGTAAGCTCAATACTTTCATTTGCTAAGGG
AGTCCAAAGAAACCTAGTCAACACGCAGTCCTGTGTGTCAGGGAAGTAGC
AGTGCTGTCACGACTTTTGAGAGCTAGCTGTTCAATTCCCCCCAGTTTGC
AAGCTTCTTTGAAACTGCACCCATTGTTCTTAACTGAATTACAAAAGGTG
TGCAATTACATAAATTACATTAAGAGCAAAGGCCACACCCATATTTTCTT
ATTGCTTTACATATTGTGATTACCTTGTACTCTTGAACATATTGGGAGCT
GTTGTGTGTGTAAGGGAGACACTAGACGGTGTTGAAAAGTGAGCGCCACA
CTGCTTCCCCACACTGTGTTTAGGAATACCTTGTTGACGGTCTGAAATTG
GCCCAGAGATTCTGATAACTATACCATAGGGATTAGTATTGTCACAAACA
TGGGTCACTAGGGTGGTCCCCCTGGTTACCCTATAAAAACGTTTCATGGG
AATTTGGCCCCAGTTTTCTTGTCTCCTTCTCAAATGTGTTAAACCTTTGG
TCCTCTAAAGGTGATATCTTCTCCACACTTTATCAAATCCTATCGCTCGT
GTCGCGCTTCTTTCCTATACTACTCTTTTGCTAAACC

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTGGACTTCTTGTGTTTATGGGCA
TCTCTTTCTTTAGGTTAGGGAAGTTTTCTTCTATAACTTTGTTGGAAATA
TTTGCTGGCCCTTTGAGTTGGGAATCTTCACTCTCCTCTATACCTATTAT
TCTTAGGTTTGGTCTTTTCATTGTGTCCTAGGTTTCTTGAATATTTTGGG
TTAGGAGCTGTTTGCTATTTGTATTTTCCTTGACTGGTGTGTCGATGCCT
TCTATGGTATCTTCTATACCTGATTTTCTCTCTTCTATCTCTTGTATTCT
ATTGGTAACACTGGCATCTGTGACTTCTGATCTCTTTCCTAGGTTTTCCA
TTGCCAGGGTTGTCTCCCTTTGTGTCTTCTTTAGTGTTTCTATTTCCATT
TTTCAATCCTGGACAGTATTGTTCAATTTCTCCACCTTGTTTGATTGCGC
TTCCTTGTATCTTCTTAAAGGATTTATTGTGTTTCCCCTTTAATGAATTA
TCATTGTTTAACCTGCGTTTTCCCGCATTTCTTTTAATTGATTTTTTTAC
TGTCCCTTCTTAAATGTCTCCTATCTTTCTTATTTTCTCGTATATTTTTG
TTCTTAAGTCTTCTTTTATTCTTTTTTTTTGAAATCATATTACTTCTTTT
CTATTATTATAAATTCCAATTTCTTTTTTACCTCCCTTTTCCTATTTCTT
TATTTATCCATTCTTGCATATTTAATTTTCAACACTTAATCT

Query= MSMg01no468_f17.b1 MSMg01no468_f17.b1 CHROMAT_FILE:
MSMg01no468_f17.b1 PHD_FILE: MSMg01no468_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:33 2005
         (434 letters)



>mm_chr2_139484672_139485505
          Length = 834

 Score =  746 bits (386), Expect = 0.0
 Identities = 422/434 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   catccagcagaacacgactagttgctgtatgtacaatttggctaggagctatccataaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 catccagcagaacacgactagttgctgtatgtacaatttggctaggagctatccataaga 575

                                                                       
Query: 61  ttctgggaagacggaccttttccagaatccaagagtaagctcaatactttcatttgctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttctgggaagacggaccttttccagaatccaagagtaagctcaatactttcatttgctaa 515

                                                                       
Query: 121 gggagtccaaagaaacctagtcaacacgcagtcctgtgtgtcagggaagtagcagtgctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gggagtccaaagaaacctagtcaacacgcagtcctgtgtgtcagggaagtagcagtgctg 455

                                                                       
Query: 181 tcacgacttttgagagctagctgttcaattccccccagtttgcaagcttctttgaaactg 240
           ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcaggacttttgagagctagcggttcaattccccccagtttgcaagcttctttgaaactg 395

                                                                       
Query: 241 cacccattgttcttaactgaattacaaaaggtgtgcaattacataaattacattaagagc 300
           ||||||||| ||  ||| ||||||||||||||||||||||||||||| || ||||||| |
Sbjct: 394 cacccattgatcagaacggaattacaaaaggtgtgcaattacataaactatattaagacc 335

                                                                       
Query: 301 aaaggccacacccatattttcttattgctttacatattgtgattaccttgtactcttgaa 360
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaaggccacacccatatttccttattgctttacatattgtgattaccttgtactcttgaa 275

                                                                       
Query: 361 catattgggagctgttgtgtgtgtaagggagacactagacggtgttgaaaagtgagcgcc 420
           |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 274 catattgggagctgttgtgtgtgtaagggaaacactagacggtgttgaagagtgagcgcc 215

                         
Query: 421 acactgcttcccca 434
           ||||||||||||||
Sbjct: 214 acactgcttcccca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space:   350625
Effective search space used:   350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)