Query= MSMg01no468_n01.b1 MSMg01no468_n01.b1 CHROMAT_FILE:
MSMg01no468_n01.b1 PHD_FILE: MSMg01no468_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:10 2005
(439 letters)
>mm_chr2_124182114_124182951
Length = 838
Score = 810 bits (419), Expect = 0.0
Identities = 434/439 (98%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 agccatccacatatcggataaagatatcctgctaggacatttgctttgcaaggttgataa 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccatccacatgtcggataaagatatcctgctaggacatttgctttgcaaggttgataa 260
Query: 61 ttttgttaaactcttttaaaagtatgtgaagggtaaaggccttgtctctctttagaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttgttaaactcttttaaaagtatgtgaagggtaaaggccttgtctctctttagaaaac 320
Query: 121 cttggaaagagtcttctcctaattctgcaataatgtttacttgtgtgaaagattaataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggaaagagtcttctcctaattctgcaataatgtttacttgtgtgaaagattaataat 380
Query: 181 attagtaaattacgtgctaagatattcattaagcttcatggtgaaaatggtaagcattta 240
|||| |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 381 attaataaattacatgctaagatattcattaaacttcatggtgaaaatg-taagcattta 439
Query: 241 ttttaggggacaatagccaagaaattttatatatattctattaaattatatactatacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttttaggggacaatagccaagaaattttatatatattctattaaattatatactatacaa 499
Query: 301 taattttatgcagagtgaggttctgattagcatacatattttgaaattattgttgcaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taattttatgcagagtgaggttctgattagcatacatattttgaaattattgttgcaacc 559
Query: 361 acgttaacatattcatcacctcatgtggtcactatttttgtgtcaggttagagaatcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acgttaacatattcatcacctcatgtggtcactatttttgtgtcaggttagagaatcaag 619
Query: 421 attgagccttatgtgcata 439
|||||||||||||||||||
Sbjct: 620 attgagccttatgtgcata 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 838
Length adjustment: 9
Effective length of query: 430
Effective length of database: 829
Effective search space: 356470
Effective search space used: 356470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_n01.g1 MSMg01no468_n01.g1 CHROMAT_FILE:
MSMg01no468_n01.g1 PHD_FILE: MSMg01no468_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:10 2005
(417 letters)
>mm_chr2_124384716_124385531
Length = 816
Score = 717 bits (371), Expect = 0.0
Identities = 404/415 (97%), Gaps = 1/415 (0%)
Strand = Plus / Minus
Query: 1 aatagcagccctttcaaactggggagtgaagttagaaggagggacaagcttcttcatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aatagcagccctttcaaactggggagtgaagttagaaggagggacaagcttcttcatgca 498
Query: 61 gactgatgggagtgagagaaaaagaggaccccgagtcccttggtacttctagtcctcagc 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 497 gactgatgggagtgagagaaaaagaggaccccgagtctcttggtacttctagtcctcagc 438
Query: 121 tagggatgagaagtcaacatgtcatcacagtcattcaaaacttgccaagctggatttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tagggatgagaagtcaacatgtcatcacagtcattcaaaacttgccaagctggatttcta 378
Query: 181 ggaagcgaaacaagggagtcatatcctttctatggacactcctttcacccctagctttta 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggaagc-aaacaagggagtcatatcctttctatggacactcctttcacccctagctttta 319
Query: 241 tgtgctgtgtcctggtgaggagtctcaggagccttcacctcagttctatcattagacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgtgctgtgtcctggtgaggagtctcaggagccttcacctcagttctatcattagacaca 259
Query: 301 tgactcgacaggaaaggatagacacccctaaactgtgaactagaactcaaggcgctctct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 258 tgactcgacaggaaaggatagacacccctaaactgtgaactagaactcaaggcgctctat 199
Query: 361 ctctctctgtatatatatatatatatatatatatatatatatatatatatatata 415
|| ||| | ||| ||| ||| ||||| ||||||||||||| ||||||||||||||
Sbjct: 198 ctatctatctatctatctatctatatctatatatatatatgtatatatatatata 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 816
Length adjustment: 9
Effective length of query: 408
Effective length of database: 807
Effective search space: 329256
Effective search space used: 329256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
