Query= MSMg01no469_h03.b1 MSMg01no469_h03.b1 CHROMAT_FILE:
MSMg01no469_h03.b1 PHD_FILE: MSMg01no469_h03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:02 2005
(380 letters)
>mm_chr2_118513922_118514700
Length = 779
Score = 683 bits (353), Expect = 0.0
Identities = 368/373 (98%), Gaps = 1/373 (0%)
Strand = Plus / Plus
Query: 8 gaattcttatttgtccgaagagacaagatcataccagcttcagaaaacaagtctgctggt 67
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcttatttggctgaagagacaagatcataccagcttcagaaaacaagtctgctggt 267
Query: 68 cttccttccattttgtaattcttcgatgcggattgattgcaatgggctttgggttttata 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cttccttccattttgtaattcttcgatgcggattgattgcaatgggctttgggttttata 327
Query: 128 aaagcactccttggcaggcaacttgacacaagcaataaggtggacacctcttttccttgc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaagcactccttggcaggcaacttgacacaagcaataaggtggacacctcttttccttgc 387
Query: 188 ttgtagtctacgtggctatttatttattatagcacctttgttgtttctacaactgctcta 247
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 388 ttgtagtctacgtggctatttatttattatagtacctttgttgtttctacaactgctcta 447
Query: 248 ctgggagtcagccatttccccaaggaagtccaggtatagagtaagaaaagcccttgggct 307
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 448 ctgggagtcagccatttccccaaggaagtccagg-agagagtaagaaaagcccttgggct 506
Query: 308 agagtagttatgctaagggagatccacacaggcctgagcctgatacccagtgcccactga 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agagtagttatgctaagggagatccacacaggcctgagcctgatacccagtgcccactga 566
Query: 368 tccaccccagggt 380
|||||||||||||
Sbjct: 567 tccaccccagggt 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 779
Length adjustment: 9
Effective length of query: 371
Effective length of database: 770
Effective search space: 285670
Effective search space used: 285670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_h03.g1 MSMg01no469_h03.g1 CHROMAT_FILE:
MSMg01no469_h03.g1 PHD_FILE: MSMg01no469_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:02 2005
(342 letters)
>mm_chr2_118701220_118701961
Length = 742
Score = 638 bits (330), Expect = 0.0
Identities = 339/342 (99%)
Strand = Plus / Minus
Query: 1 accctgcccctcttcgcttctttctacacctgatgtctactaatatagaaatcagagaac 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 542 accctgcccctcttcgcttctttctacacctgatgtctactaacatagaaatcagagaac 483
Query: 61 tcggtgcctgaggtcgtctgtagggtcacctctcaatgatgctcgtgaaagcgcctttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcggtgcctgaggtcgtctgtagggtcacctctcaatgatgctcgtgaaagcgcctttgt 423
Query: 121 ctctgagttagggtgttggtgacagaagttactgagcacccactccctctaataaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctctgagttagggtgttggtgacagaagttactgagcacccactccctctaataaggact 363
Query: 181 tgggaggtgtgggcagaacattgggtatagaaaccggacagcctacctgctttcaaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgggaggtgtgggcagaacattgggtatagaaaccggacagcctacctgctttcaaggct 303
Query: 241 ggtggttggatttttttcctctttacaaagatgagtctgcacggtctccctttctagaga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtgggtggatttttttcctctttacaaagatgagtctgcacggtctccctttctagaga 243
Query: 301 ccccctgtgtacagtacactatttcaggatggtttgtggctg 342
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 242 ccccctgtgtacagcacactatttcaggatggtttgtggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
