Query= MSMg01no470_i07.b1 MSMg01no470_i07.b1 CHROMAT_FILE:
MSMg01no470_i07.b1 PHD_FILE: MSMg01no470_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:27 2005
(241 letters)
>mm_chr2_63465337_63465977
Length = 641
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Minus
Query: 1 aaagagagtgaaggaataagcaaaatgacctagtcataaaacttaccttaagagggaaaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagagagtgaagaaataagcaaaatgacctagtcataaaacttaccttaagagggaaaa 382
Query: 61 tagttgggagtgaaaaaccaattcttcagaggacaaagataggaggataattggttcaga 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tagttgggagtgaaaaaccaattcttcagagcacaaagataggaggataattggttcaga 322
Query: 121 agaaacacttgtacctgaagtagagaaagagtaggttgataacccttgtgggatgatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaacacttgtacctgaagtagagaaagagtaggttgataacccttgtgggatgatgaa 262
Query: 181 ggagacaccagtgcagtcctcataaccatggaggctgggatggccccagcactacagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagacaccagtgcagtcctcataaccatggaggctgggatggccccagcactacagact 202
Query: 241 c 241
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_i07.g1 MSMg01no470_i07.g1 CHROMAT_FILE:
MSMg01no470_i07.g1 PHD_FILE: MSMg01no470_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:27 2005
(414 letters)
>mm_chr2_63325185_63325998
Length = 814
Score = 746 bits (386), Expect = 0.0
Identities = 407/414 (98%), Gaps = 2/414 (0%)
Strand = Plus / Plus
Query: 1 attgaccccataaaaaaaaatttcacttttaagaattctattttcttaattttttttctg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 203 attgaccccataaaaaaat-tttcacttttaagaattctattttcttaattttttt-ctg 260
Query: 61 ccttattttatgtgtgtacagattttgcttgtgtccgtgactatataccatgtatgtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttattttatgtgtgtacagattttgcttgtgtccgtgactatataccatgtatgtagt 320
Query: 121 acccaaatagtaccaaagagggcatcagaaggtgccttgtgacagaagtcacaaatggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acccaaatagtaccaaagagggcatcagaaggtgccttgtgacagaagtcacaaatggat 380
Query: 181 tcccacgtcattcatttctgagcattctgtgtcctttttcgaccaaagctccaaataatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccacgtcattcatttctgagcattctgtgtcctttttcgaccaaagctccaaataatc 440
Query: 241 catcctcctcatataaaatcataccaggcttgaaaagccatgtgctcaggtctgccacag 300
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catcctcctcaaacaaaatcataccaggcttgaaaagccatgtgctcaggtctgccacag 500
Query: 301 aaatactgtctgttacaggttgtgacactgctgatgtagtatgcgttctctatagttgtg 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 aaatactgtctgttacaggttgtgacactgctgatgtagtgtgcgttctctatagttgtg 560
Query: 361 ataaacataatagccaaaaacaacttatccatcacacctcccaattaacaacag 414
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 ataaacataatagccaaaaacaacttacccatcacacctcccaattaacaacag 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
