Query= MSMg01no470_i17.b1 MSMg01no470_i17.b1 CHROMAT_FILE:
MSMg01no470_i17.b1 PHD_FILE: MSMg01no470_i17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:29 2005
(110 letters)
>mm_chr2_5425724_5426233
Length = 510
Score = 180 bits (93), Expect = 2e-50
Identities = 105/109 (96%)
Strand = Plus / Plus
Query: 1 taacgctaagcagtaagaaccagatagcccacagggctgggctcctgctgcacagcaagg 60
|||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 201 taacactaagcagtaagaaccagatagcccacaggcctggcctcctgctgcacagcaagg 260
Query: 61 caggcactactacagtgagcaaatacgtggtatagagatggaagatgaa 109
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 caggcactactacagtgagcaagtacgtggtatagagatggaagatgaa 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 510
Length adjustment: 8
Effective length of query: 102
Effective length of database: 502
Effective search space: 51204
Effective search space used: 51204
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no470_i17.g1 MSMg01no470_i17.g1 CHROMAT_FILE:
MSMg01no470_i17.g1 PHD_FILE: MSMg01no470_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:47:30 2005
(393 letters)
>mm_chr2_5596030_5596822
Length = 793
Score = 729 bits (377), Expect = 0.0
Identities = 389/393 (98%)
Strand = Plus / Minus
Query: 1 tgccgagcctcttggaggctggagggccagttttagtaacttgccctttcccatttggcg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 593 tgccgagcctcttggaggctggagggccagttttagtaacttgccctttcccgtttggcg 534
Query: 61 atggtccatttcttttgggtgagtgttaatggtcatgggcttgaaagttttatttataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 atggtccatttcttttgggtgagtgttaatggtcatgggcttgaaagttttatttataaa 474
Query: 121 gagacgctctctcgcttgactccatatccttgtcagatagcatcttatggaactgcccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gagacgctctctcgcttgactccatatccttgtcagatagcatcttatggaactgcccct 414
Query: 181 gttttggggaagaggacagcacaaagtggcatcagaacctatagctttgatagtcacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gttttggggaagaggacagcacaaagtggcatcagaacctatagctttgatagtcacctg 354
Query: 241 tggcctttgttttttttctttctttccttccttttgatgccctgcatctagatttaggtc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tggcctttggagtttttctttctttccttccttttgatgccctgcatctagatttaggtc 294
Query: 301 aagggacagagcaaactcagcacactctccttgatcatcaacaaggtgacttctcatggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aagggacagagcaaactcagcacactctccttgatcatcaacaaggtgacttctcatggg 234
Query: 361 tcactgctgtctagaggtgtcccaccccttctg 393
|||||||||||||||||||||||||||||||||
Sbjct: 233 tcactgctgtctagaggtgtcccaccccttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
