Query= MSMg01no471_e04.b1 MSMg01no471_e04.b1 CHROMAT_FILE:
MSMg01no471_e04.b1 PHD_FILE: MSMg01no471_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:27 2005
(690 letters)
>mm_chr2_21291581_21292672
Length = 1092
Score = 1272 bits (658), Expect = 0.0
Identities = 671/676 (99%), Gaps = 2/676 (0%)
Strand = Plus / Minus
Query: 17 ctgctgggaaaagttgccaagatagttatgccaagcagttagcacagagtgtaacatcaa 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 ctgctgggaaaagttgccaagatagttatgccaagcagttagcacagagtgtaacatcaa 1026
Query: 77 gtatgtagcatattgactaacatcaatcaaaaggtgagagagaggcagtcagggaatatg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gtatgtagcatattgactaacatcaatcaaaaggtgagagagaggcagtcagggaatatg 966
Query: 137 gggaacaggaagaagagggtgggagagaaggaaagagagaaagagaaaaggaaagagaga 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 gggaacaggaagaagagggtgggagagaaggaaagagagaaagagaaaaggaaagagaga 906
Query: 197 aaagaagggagagggggtcaatcctgagactctctaaaagggatcatctaaaggccatgg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 aaagaagggagagggggtcaatcctgagactctctaaaagggatcatctaaaggccatgg 846
Query: 257 ttcattggctctaagtggcatctgctgagccctcttcttctgagaaaatgctgtggcaaa 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ttcattggctctaagtggcatctgctgagccctcttcttctgagaaaatgctgtggcaaa 786
Query: 317 gattcaaagctgatctgagagcttactaataggatcctgccagaatcaggaggagatgag 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gattcaaagctgatctgagagcttactaataggatcctgccagaatcaggaggagatgag 726
Query: 377 attgtcctgaaagtaggaaagttgctgcagtttaagataggatctataaaggaatcataa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 attgtcctgaaagtaggaaagttgctgcagtttaagataggatctataaaggaatcataa 666
Query: 437 acacatgtgggggggcgg--gggggaattcatgtagaaacaaagaaggaaggggtcttca 494
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 acacacgtggggggggggcggggggaattcatgtagaaacaaagaaggaaggggtcttca 606
Query: 495 tctgtcccttttcaagcttgcaggcattaaaggctacaggattttatggctgtataattc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tctgtcccttttcaagcttgcaggcattaaaggctacaggattttatggctgtataattc 546
Query: 555 tctaaagacaaagtacttcgatcctgacagttgatagataagtacacagggcccagtgag 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tctaaagacaaagtacttcgatcctgacagttgatagataagtacacagggcccagtgag 486
Query: 615 gctaggcagctcatctgaggcagttctacagtaaaaaggcaatgctttcctttctggggt 674
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 gctaggcagctcatctgaggcagttctacagtaaaaaggcaatgcttttctttctggggt 426
Query: 675 ttcctacccattgctt 690
||||||||||||||||
Sbjct: 425 ttcctacccattgctt 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1092
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1082
Effective search space: 735760
Effective search space used: 735760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_e04.g1 MSMg01no471_e04.g1 CHROMAT_FILE:
MSMg01no471_e04.g1 PHD_FILE: MSMg01no471_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:27 2005
(658 letters)
>mm_chr2_21101146_21102203
Length = 1058
Score = 1270 bits (657), Expect = 0.0
Identities = 657/657 (100%)
Strand = Plus / Plus
Query: 1 ataagaaaaccttaagatgaattttcaaaaatagtggcattaaaaacattctcctctaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagaaaaccttaagatgaattttcaaaaatagtggcattaaaaacattctcctctaag 260
Query: 61 tatccaagctttttaatgatgtttcaaattttgcatatgtggaatttttcaaaatgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatccaagctttttaatgatgtttcaaattttgcatatgtggaatttttcaaaatgactg 320
Query: 121 gtgtaaaaatccagtggaaataacataagctatatttctctggtagtttgcagtacctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtaaaaatccagtggaaataacataagctatatttctctggtagtttgcagtacctaa 380
Query: 181 ccaagctttcctaacttaaaatttcatgaaaaaagtaatttatttcttagatatgtgtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaagctttcctaacttaaaatttcatgaaaaaagtaatttatttcttagatatgtgtag 440
Query: 241 atttgtttcttattttgagttgaaggtacttctaggcacataaatctattgattaataag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttgtttcttattttgagttgaaggtacttctaggcacataaatctattgattaataag 500
Query: 301 ctgagtaatcttataaaaggttactttgggattcataaactccatatttacactgtaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgagtaatcttataaaaggttactttgggattcataaactccatatttacactgtaccc 560
Query: 361 agatggaaacagacccgagagcttagtgaaagattcacagtaaatcatggaacagatcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatggaaacagacccgagagcttagtgaaagattcacagtaaatcatggaacagatcac 620
Query: 421 agcatcacagtcaggatactgggcttgtgcattttgtcctgtccttgggtgactctgctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcatcacagtcaggatactgggcttgtgcattttgtcctgtccttgggtgactctgctc 680
Query: 481 cttttgaatggtgtgctggaaaactcactttgtttctgcctccctcacccctatccccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttttgaatggtgtgctggaaaactcactttgtttctgcctccctcacccctatccccag 740
Query: 541 tgatctttcaggtcctgctactgagctacatccaggccttcagaggagtctttctcgaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgatctttcaggtcctgctactgagctacatccaggccttcagaggagtctttctcgaat 800
Query: 601 tctccctggagcctttcatgaatcatcttaaattttctccctttaaatcaatctttt 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctccctggagcctttcatgaatcatcttaaattttctccctttaaatcaatctttt 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
