Query= MSMg01no471_g19.b1 MSMg01no471_g19.b1 CHROMAT_FILE:
MSMg01no471_g19.b1 PHD_FILE: MSMg01no471_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:40 2005
(144 letters)
>mm_chr2_172689805_172690348
Length = 544
Score = 269 bits (139), Expect = 6e-77
Identities = 142/143 (99%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 1 cagtttctgacacccttggaattccttggtaggcacaagaacatctgttgtcgttcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cagtttctgacacccttggaattccttggtaggcacaagaacatctgttgtcgttcacag 244
Query: 61 caaaccttgtcaaccatacccgaggttatggggatttttgagggttttgttttgttttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 caaaccttgtcaaccatacccgaggttatggggatttttgagggttttgttttgttttgt 184
Query: 121 tttgtt-gggggggttatgggtt 142
|||||| ||||||||||||||||
Sbjct: 183 tttgttggggggggttatgggtt 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no471_g19.g1 MSMg01no471_g19.g1 CHROMAT_FILE:
MSMg01no471_g19.g1 PHD_FILE: MSMg01no471_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:40 2005
(589 letters)
>mm_chr2_172548383_172549371
Length = 989
Score = 1131 bits (585), Expect = 0.0
Identities = 588/589 (99%)
Strand = Plus / Plus
Query: 1 tgaccagactggcaagagcagaaacccttaagccattgtgtctctgtggtatcccaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaccagactggcaagagcagaaacccttaagccattgtgtctctgtggtatcccaagat 260
Query: 61 cattctccacccttcccacgggcaccattgagcaggcaccactgtggggttttataaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattctccacccttcccacgggcaccattgagcaggcaccactgtggggttttataaatc 320
Query: 121 ccacaataaatttagaaatagcatagttatatagcctcatgactgagtgctgggattgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacaataaatttagaaatagcatagttatatagcctcatgactgagtgctgggattgct 380
Query: 181 ttgctatgtgcgggaggggaaaggctgtcttcctgtctctctttgtggacaggcctagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgctatgtgcgggaggggaaaggctgtcttcctgtctctctttgtggacaggcctagga 440
Query: 241 gttacctggcaaagagagagttaacagggaaagaacatgcaactcttatgccatgactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttacctggcaaagagagagttaacagggaaagaacatgcaactcttatgccatgactgg 500
Query: 301 tgtcaacgtgtcatgatctagaatcacctaggagatgaggcgtggccacgtcagtgaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtcaacgtgtcatgatctagaatcacctaggagatgaggcgtggccacgtcagtgaggg 560
Query: 361 gttgtttaggttctgtaactgaggttggaagaaccatcttccccgtgggcatcatggctc 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttgtttaggttatgtaactgaggttggaagaaccatcttccccgtgggcatcatggctc 620
Query: 421 cgtggcatcttccccgtgggcatcgtggctccgtggcatcttccccgtgggcatcgtggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgtggcatcttccccgtgggcatcgtggctccgtggcatcttccccgtgggcatcgtggc 680
Query: 481 tccgtggaatggggtcctagacagaacaagtgagctgaacatcagcattcatctctctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccgtggaatggggtcctagacagaacaagtgagctgaacatcagcattcatctctctct 740
Query: 541 gcttgctgacataatggaatgaccaagccaagctccttccaccacggct 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcttgctgacataatggaatgaccaagccaagctccttccaccacggct 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
