Query= MSMg01no471_k23.b1 MSMg01no471_k23.b1 CHROMAT_FILE:
MSMg01no471_k23.b1 PHD_FILE: MSMg01no471_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:01 2005
(629 letters)
>mm_chr2_158065257_158066285
Length = 1029
Score = 619 bits (320), Expect = 0.0
Identities = 338/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 7 ttcctatgtgttaccctgaggctccagcatgtgctgaccccaccctgttcccatcctaca 66
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttcctatgtgggagcctgaggctccagcatgtgctgaccccaccctgttcccatcctaca 284
Query: 67 aggcacagcatggacagcatcagtcccactttcaacgctacagggaagaggtctggggtg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aggcacagcatggacagcatcagtcccactttcaacgctacagggaagaggtctggggtg 224
Query: 127 tctggcgtggttctagagccataccctctccactataatgtccttcaatcccacgaagac 186
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 223 tctggggtggttctagagccataccctctccactataatgtccttcaatcccacgaagcc 164
Query: 187 ctgagacataaacaaacccttcctctcttaagttgattctgccagacactggttcacagg 246
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ctgagacataa-caaacccttcctctcttaagttgattctgccagacactggttcacagg 105
Query: 247 aagacaagagtaattaatacaactttgttactattgttttggttttggagacagagtgtt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 aagacaagagtaattaatacaactttgttactattgttttggttttggagacagagtgtt 45
Query: 307 cctacatagcttgatctgatgttgaactctcgatcctcctgcct 350
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 cctacatagcttgatctgatgttgaactctcgatcctcctgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_k23.g1 MSMg01no471_k23.g1 CHROMAT_FILE:
MSMg01no471_k23.g1 PHD_FILE: MSMg01no471_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:01 2005
(168 letters)
>mm_chr2_157861886_157862453
Length = 568
Score = 311 bits (161), Expect = 1e-89
Identities = 164/165 (99%)
Strand = Plus / Plus
Query: 1 actcactggatttctttttcaagtacattttccatggctgagttgtctcattagtttatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcactggatttctttttcaagtacattttccatggctgagttgtctcattagtttatg 260
Query: 61 atcaaaaaccagagctagtactgcaaaggagcagttcactctccttcgcagtgtctcttc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 atcaaaaaccagagctagtactgcaaaggagcagttcactctccttcgaagtgtctcttc 320
Query: 121 aatagcggagactggtttgagactttaatttccccctctttctag 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagcggagactggtttgagactttaatttccccctctttctag 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
