Query= MSMg01no471_n20.b1 MSMg01no471_n20.b1 CHROMAT_FILE:
MSMg01no471_n20.b1 PHD_FILE: MSMg01no471_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:16 2005
(641 letters)
>mm_chr2_80679029_80680070
Length = 1042
Score = 1125 bits (582), Expect = 0.0
Identities = 624/638 (97%), Gaps = 1/638 (0%)
Strand = Plus / Plus
Query: 5 gaattcatcttgttatatagaacatcaaactttaaaaaattttatatgcaactaaaatac 64
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcttgatatatagaacatcaaactttaaaaaattttatatgcaactaaaatac 264
Query: 65 ccctttttacatgtactatatttagagtactccttttgttatttctgaatagtctatgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccctttttacatgtactatatttagagtactccttttgttatttctgaatagtctatgtt 324
Query: 125 aacattttccatcctgaatgttcttctccatttcaggggactgaggcataatggcgggta 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 aacattttccatcctgaatgttcttctccatttcaggggactgaggcataatggtgggta 384
Query: 185 gaagaa-gtaattcaaccattaaaacaaaaagatttcaagcatgaatgtactgtaggtaa 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagaaagtaattcaaccattaaaacaaaaagatttcaagcatgaatgtactgtaggtaa 444
Query: 244 aaaaatcctaaatgaaaaatagaacatatgttgaaagaaaagacctgtaaacattttagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaaatcctaaatgaaaaatagaacatatgttgaaagaaaagacctgtaaacattttagt 504
Query: 304 taatgaaaataatttttgtgtatgttcttgtattgaaaagcagatgtgtgtgcacatgtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taatgaaaataatttttgtgtatgttcttgtattgaaaagcagatgtgtgtgcacatgtg 564
Query: 364 tggaggccagagatgaatctctggtatgattcctcaggattcaccgaccttgtttgatga 423
|||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct: 565 tggaggccagagatgaatctctggtatgattccttaggactcaccgaccctgtttgatga 624
Query: 424 gacaaggactcttattgggcactctgtggaggttaggttagctagatagactcatgggcc 483
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacaaggactcttattgggcactttgtggaggttaggttagctagatagactcatgggcc 684
Query: 484 tgccattctctgtcttcccagtgctgagattgccaagggaacctctacacccagatttgt 543
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 685 tgccattatctgtcttcccagtgctgagattgccaagggaacctccacacccagatctgt 744
Query: 544 cttttttatttggctgctggagattgaactcagatcctgtgcttaactattgtctcaacc 603
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 745 cttttttatttggctgctggagatcgaactcaggtcctgtgcttaactattgtctcaacc 804
Query: 604 ctgaatatatacaatttcattaaacgtggcatgtgaag 641
||||||||||||| ||||||||||||||||||||||||
Sbjct: 805 ctgaatatatacagtttcattaaacgtggcatgtgaag 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_n20.g1 MSMg01no471_n20.g1 CHROMAT_FILE:
MSMg01no471_n20.g1 PHD_FILE: MSMg01no471_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:16 2005
(650 letters)
>mm_chr2_80871209_80872258
Length = 1050
Score = 1226 bits (634), Expect = 0.0
Identities = 646/650 (99%)
Strand = Plus / Minus
Query: 1 tttctggtggttcaacaattgaatattttccatagttactaaagagaatgaggaacaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tttctggtggttcaacaattgaatattttccatagttactaaagagaatgaggaacaaaa 791
Query: 61 tttccttttagatattagaatttatgcacagggaacagaattttaaaatataattgtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tttccttttagatattagaatttatgcacagggaacagaattttaaaatataattgtttt 731
Query: 121 tacaatgatatgtgtttagtcttagagtttccagtagtggaaatgaaaggtttgcaagcc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 730 tacaatgatatgtgtttagtcttagagtttccagtagtggaaataaaaggtttgcaagcc 671
Query: 181 ccgaacaaagtccaaatccgatacttttcagaggacaataacaaggccaaaaaatgttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ccgaacaaagtccaaatccgatacttttcagaggacaataacaaggccaaaaaatgttaa 611
Query: 241 tttaactggtaccaacatggcactaacactcttatctcacaattaaattcaacaataaag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 610 tttaactggtaccaacatggcactaacactcttatctcacaattaaattcaataataaag 551
Query: 301 agttgcttaaatttaaaaaactgaaaactataaagacgtagcaaattaaagctgctcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agttgcttaaatttaaaaaactgaaaactataaagacgtagcaaattaaagctgctcaac 491
Query: 361 taggagttgtttcccaacccttgttaatatctcagaatgattctgagatagtattctggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 taggagttgtttcccaacccttgttaatatctcagaatgattctgagatagtattctggc 431
Query: 421 atctagcctgccatgtaagcccatctatatgcagcagaaccccactaacctgactataat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atctagcctgccatgtaagcccatctatatgcagcagaaccccactaacctgactataat 371
Query: 481 tccaatattatcctttttacaaaatagtgatggtatgtcactcatttgtccaaactcaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tccaatattatcctttttacaaaatagtgatggtatgtcactcatttgtccaaactcaga 311
Query: 541 gcacaaagggtgatgggaggggtgagctcttctgcacatccaccttttctattgtgatgg 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcacaaagggtgatgggaggagtgagctcttctgcacatccaccttttctattgtgatgg 251
Query: 601 gaagaaagggaatgtgcttttcctggggcatttttcagattgatttgcca 650
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaagaaaggaaatgtgcttttcctggggcatttttcagattgatttgcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
