Query= MSMg01no471_p13.b1 MSMg01no471_p13.b1 CHROMAT_FILE:
MSMg01no471_p13.b1 PHD_FILE: MSMg01no471_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:25 2005
(674 letters)
>mm_chr2_94349489_94350562
Length = 1074
Score = 1156 bits (598), Expect = 0.0
Identities = 616/622 (99%), Gaps = 2/622 (0%)
Strand = Plus / Minus
Query: 1 cgggtctccttggggagatcttctcagcagtgaaattgaattcaatcattcaagcctgtg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 621 cgggtctccttggggagatcttctcagcagtgaaattgaagacaatcattcaagcctgcg 562
Query: 61 cttcctttctgaagcaagccacatgggcacagttactgaactggatatggcaggtgtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcctttctgaagcaagccacatgggcacagttactgaactggatatggcaggtgtggg 502
Query: 121 ctttgtgttggagaggaaattctgccagtgtggcaggtattatttttaatccaaaatcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttgtgttggagaggaaattctgccagtgtggcaggtattatttttaatccaaaatcct 442
Query: 181 gttctttgactacatgtcttaaactctctttgctgtgatcctgtactacaaaagtcagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttctttgactacatgtcttaaactctctttgctgtgatcctgtactacaaaagtcagta 382
Query: 241 -tnaattttctgaggtgcttctcctggtgtgctgcatactgtctgacctctgctactctg 299
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gt-aattttctgaggtgcttctcctggtgtgctgcatactgtctgacctctgctactctg 323
Query: 300 tacaacagctgctgctatccagtacttgctacatatgtggcacacccagaggctttatgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tacaacagctgctgctatccagtacttgctacatatgtggcacacccagaggctttatgt 263
Query: 360 gcagtctctcattcaatccaaaaatcaactagcatgtagactggcataaatctattcatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcagtctctcattcaatccaaaaatcaactagcatgtagactggcataaatctattcatt 203
Query: 420 ggattatcatccacttcctacagaccctaaagggcttggaaagaattgtaacttgcctgt 479
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 202 ggattatcatccacttcctacagaccctaaagggcttggaaaggattgtaacttgcctgt 143
Query: 480 ggagccaagaaatagcagaagtcaggactcaaaagctagcttaagctattctagagctaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ggagccaagaaatagcagaagtcaggactcaaaagctagcttaagctattctagagctaa 83
Query: 540 gttccccatgactatgctataccatctcatagctcttgccctcgtgactgaatctaccag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gttccccatgactatgctataccatctcatagctcttgccctcgtgactgaatctaccag 23
Query: 600 aagccctgaggcacaaagtctg 621
||||||||||||||||||||||
Sbjct: 22 aagccctgaggcacaaagtctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_p13.g1 MSMg01no471_p13.g1 CHROMAT_FILE:
MSMg01no471_p13.g1 PHD_FILE: MSMg01no471_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:26 2005
(646 letters)
>mm_chr2_94213841_94214886
Length = 1046
Score = 1243 bits (643), Expect = 0.0
Identities = 645/646 (99%)
Strand = Plus / Plus
Query: 1 taggttaggctgtgcatggtggttttaacaagaagacttggggctacagttcatggcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggttaggctgtgcatggtggttttaacaagaagacttggggctacagttcatggcact 260
Query: 61 gttttgagaagggttaggaggtgcagccttgttggaggaggcggctcattgggggtttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttgagaagggttaggaggtgcagccttgttggaggaggcggctcattgggggtttaa 320
Query: 121 aagtccacactaggctcagtctcactttttttctgactagtacttgtggatcaaatgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtccacactaggctcagtctcactttttttctgactagtacttgtggatcaaatgtaa 380
Query: 181 gttctcagctattgctccagtagaatgtacatatttgtctgtctgctgccaagttctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctcagctattgctccagtagaatgtacatatttgtctgtctgctgccaagttctttg 440
Query: 241 acacaatgtttatgaactaaccctttaaaactgtaagccagccccaattaaaccctctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacaatgtttatgaactaaccctttaaaactgtaagccagccccaattaaaccctctct 500
Query: 301 ttttatcagttgctgtggccatgctgtctcttcatagcaaaagaaaagtaactaagacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttatcagttgctgtggccatgctgtctcttcatagcaaaagaaaagtaactaagacac 560
Query: 361 tgggttatggaatgaaactgtgtcttaaaacaaatgtacaaacaacttgtacagatctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggttatggaatgaaactgtgtcttaaaacaaatgtacaaacaacttgtacagatctaa 620
Query: 421 tttgagagcttgtaattacaaatgctctctagtgcctagcactgatgatgctggggagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgagagcttgtaattacaaatgctctctagtgcctagcactgatgatgctggggagtc 680
Query: 481 agctgccctgtcacggaacttgaacagggatggatgtgtggtgtgaaagtttcctttaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agctgccctgtcacggaacttgaacagggatggatgtgtggtgtgaaagtttcctttaat 740
Query: 541 tgttttgaccatgttaaggtgatgcctcttgacttcgttctaacccaagggtctgtggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgttttgaccatgttaaggtgatgcctcttgacttcgttctaacccaagggtctgtggtg 800
Query: 601 ctagtgcttcagggaaatttttgcttccagntacctatgctgagcc 646
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 801 ctagtgcttcagggaaatttttgcttccagttacctatgctgagcc 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
