CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATCCATTCTATCTGGGAGGGTAGAGTTGGGGCATGAAGCAGAAG
CTCTTCATATCCTGGTTGAGCAGAAAGCAGAAGATAAAGCCAGAATCAGA
GACATCACTAACTTTCAGACAGCCACACTTAGTAACCTGCTGCCACCAGC
CAGGTGCCACTATATGAAGATTTCACAATATTCTAAAACAGCGCCACCAG
TTAGAAACCTTTAGCGAATGCATGCATGCTGAACATTTTAGACTGAAAAC
CACACACCAGAACTCATTCCAATACCAAGTATACAAATAAACTGATTAAA
ATTTAACAGAGGGCATAAAGAGACATTGTACAAAAGAAGACACATAGATG
CACAGAATGCATTTAAAATAGTCAATATACCTGACAACTAGCAGAATGTG
CATGAAATAAAACAAGGGACATCAACCTCACAATTATAAGAAGTCAATTA
TTAAAAAGGAGGGAAACAAGAAGTATTGGGAATGATGAGGATAGAGAAAA
CTTCATGTTGGGAAGGTTGGTCATTGCAGTTAGGGAATACATTATGGATA
GTCTTCAGAAAATTAAAATTACATGTGATTCCCTAGTCACACCACTGAAC
CTCTAGGGAAAGGACACGATGAAAAATATCCACACATCCATAATCATTGC
AGGATCATTCACAGTAGTCGAAATATAAAAGCAATTGATGAATGGATGN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCATTTGCAAACAGAGAAACATG
GTCCTTACTTTCAAATCACATTTCAAAGATTGTGGCTTTTTAATGTAAAC
AAATAATATATAGTGGCATTAAACGATACACACTTTGTTTCTCAACGTTA
TTGAAAATGAAGGTGGATCAGGCTGCCAGCAGTGTCACCATCGCCTAATG
GCTCTTTCAGAGGACAGCTACTTTCCCACTATGTCTCTGGGCCTTCTTCT
ATAAAATTTAGGATACTCTCAACAACCTTCTGACTTCATATGAACCCAGT
TACCTATCAAAGACGTTATTATCAAATGTACTCACACTGAGAATTAGGAC
TCCAAATATGAATTGGGAGATTCAGTTTATCCAGCAGCAACAATAAAAAC
TTGTAAAAAGCAGACTGATTCTTATGCAAAGATAGAATATATTTTCAAGT
TATTAAGGGAAATAATGTCAGCCTTGACACCTAACAGGTACTGATTATTC
CCACAGAGATTTGATCTACTTTTTCTTTCACTAAGACTGTGAGAGCAATT
TTGAGACCTGCTTCTAAGCCAGGGTGAATGATAGCAACATGTATTGACTT
ACTGACTTTTAATCCCAAGAACTTAAAATCATTTTAGAACTCAACGGGAA
GTTATGGACAGGGGAGCAGGTTTGAAATAGTCTGCTAAGAGAGTCGTTAT
ACCTCACTGG

Query= MSMg01no472_b02.g1 MSMg01no472_b02.g1 CHROMAT_FILE:
MSMg01no472_b02.g1 PHD_FILE: MSMg01no472_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:34 2005
         (586 letters)



>mm_chr2_63059283_63060268
          Length = 986

 Score =  808 bits (418), Expect = 0.0
 Identities = 439/446 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcatttgcaaacagagaaacatggtccttactttcaaatcacatttcaaagattgtggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 446 ttcatttgcaaacagagaaacatggtccttactttcaaatcacatttcaaagactgtggc 387

                                                                       
Query: 61  tttttaatgtaaacaaataatatatagtggcattaaacgatacacactttgtttctcaac 120
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 386 tttttaatgtaaacaaataatatatagtggcattaaacaatacatactttgtttctcaac 327

                                                                       
Query: 121 gttattgaaaatgaaggtggatcaggctgccagcagtgtcaccatcgcctaatggctctt 180
           |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 326 gttattgaaaatgaaggtggatcaggctgccagcagtgtcaccatcacctgatggctctt 267

                                                                       
Query: 181 tcagaggacagctactttcccactatgtctctgggccttcttctataaaatttaggatac 240
           ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcagaggacggccactttcccactatgtctctgggccttcttctataaaatttaggatac 207

                                                                       
Query: 241 tctcaacaaccttctgacttcatatgaacccagttacctatcaaagacgttattatcaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tctcaacaaccttctgacttcatatgaacccagttacctatcaaagacgttattatcaaa 147

                                                                       
Query: 301 tgtactcacactgagaattaggactccaaatatgaattgggagattcagtttatccagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tgtactcacactgagaattaggactccaaatatgaattgggagattcagtttatccagca 87

                                                                       
Query: 361 gcaacaataaaaacttgtaaaaagcagactgattcttatgcaaagatagaatatattttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  gcaacaataaaaacttgtaaaaagcagactgattcttatgcaaagatagaatatattttc 27

                                     
Query: 421 aagttattaagggaaataatgtcagc 446
           ||||||||||||||||||||||||||
Sbjct: 26  aagttattaagggaaataatgtcagc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)