TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGTGTTCCTTACTTTTAAATATCCCAAAGATACTATTCCACTATT
GTTTTCCTTAATTCCTGGCTCTTTTAATATTTCTGCCTTTCTTCCATGAT
GCTCTCCAAGTCTTGATGGCAGCACTGGAGGTGATTAGGTGTCCCAGCTA
AGGCTGAGTACGGCACTGACAACTTCATCTCCGTACTTGGACCAATTGTG
TTTCTGGGTTAACCACCATTGATGCACAACAAACTCCTCCACTGAGATCT
GAGAGCTGCAGCGATCTACAGACACAGAATACCAAATTTAGATGGTGGTT
TGATAACAGAAAAACAAAAAAAAAAGATGTAGGTCCATCCCTGGGGGCTG
TGAGATCCCAAGTTAGGTTCTTGGCCAGACTTAATGAACCAGCTATAAGT
TTCTCCTATGGAATATGCATTAAATCCAATAAAAAATTAGTAGGTTTTCC
ACATAAAACTCATTGCACAAACACACCTGCTATTATTGTAGCTCACAAGA
TCATAGCATGGCAAGACTATTGAGAGCCTCCCCCAGAAGCCTATAAAATG
CCTTCCTATATCTTGAAATCTGGCCACTGTGGAGGAAGCTACCTTGTCAG
GACCAATGAGATTTCTTCATGGCTGCTGACTAAGGCAACTAAAAGCATTG
GGAGTACCTTGGATTGTGTGTGGGGTTGGAGATGGAAGATCCCTTAAATA
ACCCTCTTCCAAGGTGGTCGGAAAAATTTCT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXACATTTCTTTTTTTAAAAGATGCACCATT
ACACAAAATAACAGAACAGTAATTTATTTATTCAAATTATATGTTTCATA
TTTTGCATCACAGCAAATGTACATCTCAGACATAAAGAGAAAAGTTCAAA
TATTTGTATTGTCTACCATTTTAGGTAAAAAGTATTCTGATAGTGCATTT
AAAATTTTTAGCAATTAAAAACATTTACTGTTTTAAAACCTGTGTATAAA
CTAGCTAAGGACAGATGACAATATGACAAATATGTGTAGTGTGTTGATGG
AGCTTGAATCCTAAAGAGGCAAGCACTCAAAAAGCAAGTAAAATAATATT
CAAAACTGCAGATTGCAGGAAGAAAACTACAAGGTTGCCTGATGCCTGCT
GTGAGAGAAGATTGTGAATTGTTTTCAACATTCACAATATTTTATATTCT
TCTAGCAATATATTATGTGCTTGTAGATAGCAAAGGCTAGGTGAGTTGGT
CAGATCAGTGTGAAAAACTGAGTTATTTATACAACATCTGCACCCTTTCA
TTCTGATCACTTGCTATATCATAATACATTTGTTTTCTAGAAAGGAGAGT
ATAATTCTATACATTTTAAATTTTGTCTCAAGTATATACCCTTCCTTTGA
GCAAGCAATATATATATAAAAGGTCCAGAAAAAAACTCTAAAAATCTTAT
TGGGTTTAACCTCCTTGGCATTTGGGCACTCCCGGAAGAAGAG

Query= MSMg01no473_a07.g1 MSMg01no473_a07.g1 CHROMAT_FILE:
MSMg01no473_a07.g1 PHD_FILE: MSMg01no473_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:52 2005
         (546 letters)



>mm_chr2_63129276_63130221
          Length = 946

 Score =  978 bits (506), Expect = 0.0
 Identities = 536/546 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acatttctttttttaaaagatgcaccattacacaaaataacagaacagtaatttatttat 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 acatttctttttttaaaagatgcaccattatacaaaataacagaacagtaatttatttat 260

                                                                       
Query: 61  tcaaattatatgtttcatattttgcatcacagcaaatgtacatctcagacataaagagaa 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaattatatttttcatattttgcatcacagcaaatgtacatctcagacataaagagaa 320

                                                                       
Query: 121 aagttcaaatatttgtattgtctaccattttaggtaaaaagtattctgatagtgcattta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 321 aagttcaaatatttgtattgtctaccattttaggtaaaaagtattctgatagtactttta 380

                                                                       
Query: 181 aaatttttagcaattaaaaacatttactgttttaaaacctgtgtataaactagctaagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 aaatttttagcaattaaaaacatttactgttttaaaacctgtgtataaactagctgagga 440

                                                                       
Query: 241 cagatgacaatatgacaaatatgtgtagtgtgttgatggagcttgaatcctaaagaggca 300
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 441 cagatgacaatatgacaaatatgtgtagtgtactgatggagcttgaatcctaaagaggca 500

                                                                       
Query: 301 agcactcaaaaagcaagtaaaataatattcaaaactgcagattgcaggaagaaaactaca 360
           |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 agcactgaaaaagcaagtaaaataatattcaaaactgcagactgcaggaagaaaactaca 560

                                                                       
Query: 361 aggttgcctgatgcctgctgtgagagaagattgtgaattgttttcaacattcacaatatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggttgcctgatgcctgctgtgagagaagattgtgaattgttttcaacattcacaatatt 620

                                                                       
Query: 421 ttatattcttctagcaatatattatgtgcttgtagatagcaaaggctaggtgagttggtc 480
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttattttcttctagcaatatattatgtgcttgtagatagcaaaggctaggtgagttggtc 680

                                                                       
Query: 481 agatcagtgtgaaaaactgagttatttatacaacatctgcaccctttcattctgatcact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agatcagtgtgaaaaactgagttatttatacaacatctgcaccctttcattctgatcact 740

                 
Query: 541 tgctat 546
           ||||||
Sbjct: 741 tgctat 746


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space:   501696
Effective search space used:   501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)