Query= MSMg01no473_f08.b1 MSMg01no473_f08.b1 CHROMAT_FILE:
MSMg01no473_f08.b1 PHD_FILE: MSMg01no473_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:22 2005
(549 letters)
>mm_chr2_166560183_166561131
Length = 949
Score = 526 bits (272), Expect = e-153
Identities = 305/316 (96%), Gaps = 1/316 (0%)
Strand = Plus / Minus
Query: 1 cctcattgggcattgcacacatgtggcaaatggcaaatatacagatggatggacacacac 60
|||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 315 cctcatagggcactgcacacatgtggcaaatggcaaatacacagatggatggacacacac 256
Query: 61 acggacacggacacacacaagacaaaataaaataagcctttattgaaggcaaacaagcaa 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acacacacggacacacacaagacaaaataaaataagcctttattgaaggcaaacaagcaa 196
Query: 121 ggcatggtggtttgtgtctgaggccacagcccttgagaggctgaagcaggactgccatga 180
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 195 ggcatggtggttcgtgtctgaggccacaacccttgagaggctgaagcaggactgccatga 136
Query: 181 gttcaagccaaacagagtgcccttgaatgtcttgggatacagagggagactgtctttaaa 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 135 gttcaagccaaacagagtgcccttgaatgtcttgagatacagagggagactgtctttaaa 76
Query: 241 ttttaaaaaggaagaaatgtaaaataaaaccaagtggctaagagcactgtgccttccaga 300
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ttttaaaaaggaagaaagg-aaaataaaaccaagtggctaagagcactgtgccttccaga 17
Query: 301 gcagcagttctcaacc 316
||||| ||||||||||
Sbjct: 16 gcagcggttctcaacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_f08.g1 MSMg01no473_f08.g1 CHROMAT_FILE:
MSMg01no473_f08.g1 PHD_FILE: MSMg01no473_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:22 2005
(468 letters)
>mm_chr2_166383525_166384392
Length = 868
Score = 843 bits (436), Expect = 0.0
Identities = 460/468 (98%)
Strand = Plus / Plus
Query: 1 cttttttctctaattcaagcatatctcctccgtgacacttccataattcccacagtttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttttctctaattcaagcatatctcctccgtgacacttccataattcccacagtttgc 260
Query: 61 tgggtcaaggcctggcacttagaaaataacagacctatccatcacacccctgtgaagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggtcaaggcctggcacttagaaaataacagacctatccatcacacccctgtgaagcat 320
Query: 121 ccatagcaaactcaaccacagagatgacttgcctggaagcagtctcaggggaggtagctg 180
|||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatagcaaactcagccacagagacaacttgcctggaagcagtctcaggggaggtagctg 380
Query: 181 aacagatgtcaccacccctgtgttgctcccaagagtgttaagggaatgtcttcttgaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagatgtcaccacccctgtgttgctcccaagagtgttaagggaatgtcttcttgaagg 440
Query: 241 aaagaattcagtctagagacagagacagctggagcagaagtttatgtatcaaagcaaaca 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagaattcagtcaagagacagagacagctggagcagaagtttatgtatcaaagcaaaca 500
Query: 301 ccacagacacactggagtggctgccccacggttcagtgttacggaggctaaggatgcttt 360
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccacagacacaccggagcggctgccccacggttcagtgttacggaggctaaggatgcttt 560
Query: 361 catgaatattcatgaagtaggtagcatattcatggagtaagttatcccttggaaatccct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 catgaatattcatgaagtaggtagcatattcatggagtaagttatcccttggaaatccat 620
Query: 421 tttagggaatttcttcccatgatcctctgaagaagcccatagggacgt 468
||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttagggcatttcttcccatgatcctctgaagaagcccatagggacgt 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
