Query= MSMg01no473_f11.b1 MSMg01no473_f11.b1 CHROMAT_FILE:
MSMg01no473_f11.b1 PHD_FILE: MSMg01no473_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:23 2005
(610 letters)
>mm_chr2_45734424_45735432
Length = 1009
Score = 1083 bits (560), Expect = 0.0
Identities = 598/612 (97%), Gaps = 7/612 (1%)
Strand = Plus / Plus
Query: 1 taataacatgacaaagtatatcatacttgagatgaggatttatacacaatagcatgtgtt 60
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 201 taataacatgacaaagtatatcagacttgagatgagaatttatacacaatagcatgtgtt 260
Query: 61 ttgtgggtagccatagcccactgaaatctaatttaatcaaatatttaaagaggtaataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgggtagccatagcccactgaaatctaatttaatcaaatatttaaagaggtaataat 320
Query: 121 taatttttaaagaatcaaagtgaaccataactagggagaaatgttattgtttattttt-a 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 taatttttaaagaatcaaagtgaaccataactagggagaaatgttattgtttatttttta 380
Query: 180 atgccagaagagtattcctgatgcaattttaatatttcattaaggcagtaactttcatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgccagaagagtattcctgatgcaattttaatatttcattaaggcagtaactttcatat 440
Query: 240 tgtgggttttatcccattattttatgtttgatgatttttttttctcttaaaagaaaagtt 299
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tgtgggttttatcccaggattttatgtttgatgattttttt--ctcttaaaagaaaagtt 498
Query: 300 ggaattttattgcctagtagtggtaaggtagaggcataatttacctatttgctaaattac 359
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggaattttatggcctagtagtggtaaggtagaggcataatttacctatttgctaaattac 558
Query: 360 tggggcctaaacaagcaaatgtgaaaa-cgtcccagcttattttagaaacagagcatgca 418
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 559 tggggcctaaacaagcaaatgtgaaaaacgtcccagcttattttagaaacagagcatgca 618
Query: 419 cacatgtacaattgtacaattctccatttttttttgaggaaaacattttgttacattctc 478
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 619 cacatgtacaattgtacaattctccattttttt--gaggaaagcattttgttacattctt 676
Query: 479 ttcaccaaa-ttcttatgttccatgccagtatataaagtgtgcaaaatcctttaagtctg 537
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttcaccaaaattcttatgttccatgccagtatataaagtgtgcaaaatcctttaagtctg 736
Query: 538 actagttgttttagttttaaaagactgtatttctcacattttttcatgacttgttttttt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 actagttgttttagttttaaaagactgtatttctcacattttttcatgacttgttttttt 796
Query: 598 ataaaaatccat 609
||||||||||||
Sbjct: 797 ataaaaatccat 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1009
Length adjustment: 10
Effective length of query: 600
Effective length of database: 999
Effective search space: 599400
Effective search space used: 599400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_f11.g1 MSMg01no473_f11.g1 CHROMAT_FILE:
MSMg01no473_f11.g1 PHD_FILE: MSMg01no473_f11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:23 2005
(458 letters)
>mm_chr2_45926309_45927166
Length = 858
Score = 456 bits (236), Expect = e-132
Identities = 242/244 (99%)
Strand = Plus / Minus
Query: 4 aatatatacagtatttacttccgtgtagccaaagtaagcttaaactacagctgtaaatta 63
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 447 aatatatacagtatttacttccgtgtagccagagtaagcttaaagtacagctgtaaatta 388
Query: 64 gtgttcagaaaattgcaattggaatataatggggcgcacttggaaacacatgctagcagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtgttcagaaaattgcaattggaatataatggggcgcacttggaaacacatgctagcagc 328
Query: 124 attatggcttaacgtgtccacgggtacaattgcatatatgaaagcatgatttccaataga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attatggcttaacgtgtccacgggtacaattgcatatatgaaagcatgatttccaataga 268
Query: 184 gcacgtagctaatgcttcagacattttacttaaaatggatatttgaaccaaaaaggtttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gcacgtagctaatgcttcagacattttacttaaaatggatatttgaaccaaaaaggtttt 208
Query: 244 ttca 247
||||
Sbjct: 207 ttca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
