Query= MSMg01no474_k18.b1 MSMg01no474_k18.b1 CHROMAT_FILE:
MSMg01no474_k18.b1 PHD_FILE: MSMg01no474_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:12 2005
(494 letters)
>mm_chr2_128332441_128333336
Length = 896
Score = 924 bits (478), Expect = 0.0
Identities = 491/496 (98%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 1 aagacctgagtgtggttcccagcacccacaatgggcggcccacaactgtctataactcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagacctgagtgtggttcccagcacccacaatgggcggcccacaactgtctataactcct 260
Query: 61 gctccaggaaatcctgcatttacatgcactggcccacagacagataaacgcacatataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctccaggaaatcctgcatttacatgcactggcccacagacagataaacgcacatataca 320
Query: 121 ttctatttaaaaagattgaattgctaaattcaatttcatcacaattaagaatgtctgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctatttaaaaagattgaattgctaaattcaatttcatcacaattaagaatgtctgtct 380
Query: 181 ctccatttagagggtgagatgcttatgtgctgagagacagttagttgtagaatgaagatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccatttagagggtgagatgcttatgtgctgagagacagttagttgtagaatgaagatc 440
Query: 241 caacaaatatttcatatccaacatatataaagaatatctccaaaccaggtaaagtctgac 300
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacaaagaattcatatccaacatatataaagaatatctccaaaccaggtaaagtctgac 500
Query: 301 agtctagtgtaacaactgagcaatagtgtcatcgggcccttcacaaaaaggaacagcata 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 agtctagtgtaacaactgagcaatagtgtcatcgggcccttcacaaaaaggaacagcaca 560
Query: 361 aacaaccagcaaagagctgaaaaggtacacattattactcattgtgggaaaaa--aaaaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 aacaaccagcaaagagctgaaaaggtacacattattactcattgtgggaaaaacaaaaaa 620
Query: 419 caaaaaacccttctgtccaccttatagaaggatctcacagatgagtatctaaaggctgcc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaaaacccttctgtccaccttatagaaggatctcacagatgagtatctaaaggctgcc 680
Query: 479 aagcacaaagggacca 494
||||||||||||||||
Sbjct: 681 aagcacaaagggacca 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 896
Length adjustment: 10
Effective length of query: 484
Effective length of database: 886
Effective search space: 428824
Effective search space used: 428824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_k18.g1 MSMg01no474_k18.g1 CHROMAT_FILE:
MSMg01no474_k18.g1 PHD_FILE: MSMg01no474_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:12 2005
(474 letters)
>mm_chr2_128439523_128440396
Length = 874
Score = 886 bits (458), Expect = 0.0
Identities = 470/474 (99%)
Strand = Plus / Minus
Query: 1 ctagtagaatttaggagggtatggcctcagtcataggaagtaaattacctctggactata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctagtagaatttaggagggtatggcctcagtcataggaagtaaattacctctggactata 497
Query: 61 ccatgttgtggtcacatcttataaatctcaaaggatcaacataagttgtgatctatgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ccatgttgtggtcacatcttataaatctcaaaggatcaacataagttgtgatctatgatc 437
Query: 121 gtaactgcaggcatgttttgttgaaatctaactctacctagatctaagcccagtagctaa 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 436 gtaactgcaggcatgttttgttgaaatctaactctacccagatctaagcccagtagctaa 377
Query: 181 agaacatggaagtacccagcaatgaaaagtaggtgaaattcaatatgtggcatacaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agaacatggaagtacccagcaatgaaaagtaggtgaaattcaatatgtggcatacaataa 317
Query: 241 aaacagtcccacccactccccagggcatagtagtccacacctataatttaagcatttgga 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaacagccccacccactccccagggcatagtagtccacacctataatttaagcatttgga 257
Query: 301 aatcaaattccttggaggggaagaagttcaaggccatctctggctacagagtgaggtagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 256 aatcaaattccttggaggggaagaagttcaaggccatctctggctacagagtgaggtggg 197
Query: 361 agctggtcttggcccacacaggaccctgtctcaggaaaaaataacaacaataaacaacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 agctggtcttggcccacacaggaccctgtctcaggaaaaaataacaacaataaacaacag 137
Query: 421 taacagcagctactgtttccaggcccacacgctgccatgctagtgcagcccctg 474
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 136 taacagcagctactgtctccaggcccacacgctgccatgctagtgcagcccctg 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
