NNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAGACGATCC
GCGGAATTCTTTGATTACCATCATGGCTACATTTATCTATGCTATACAGA
TATGATTTAGAACATCATATGGAATTATGCTGGTCAAACAAGTTGGCGAT
GGCAGTTTTGTTTTGTTTTGTTTTGTTTTTAATTTCATAATCTCACTAGA
TTTGGGAAAGCAACTCTTTTTCCAGTACCAATCATGATCACCTTCCTATT
GAATGGACCCTAACTCCAATTAAATAGCTAATAGTTGTCATGAATCTATG
GGTGTGATGCTACCTTTATTTATATCTGGCCATGCTGGTAATTATTACAG
TTCACAAGTGTTGAAGCTGTGTAGGCTATTTGATTATGTCCCTCTCTTGG
CAACATGTATATTATTTTCTGTAACCATGGGAACTAGACCACAGGAAAGG
GGCTTTAAGGTCAAATCCAGCCCAAACCATCCGAGTCCTATGTCTTAAGT
ATACAGTGTCTTCAGTAACAGGGTTCTACATCAATATCTAAGAGGGAACA
AAGGATTATATCGATAACCTAGATTGTTTTAAGAGTCACTCGGACTACCC
TGACTAACTATTTAAAAGGAGGCTTCTTGTGACTGGAACTGTGTTTTTTT
TTTTTTTTTTAGCCTATGGCATTTATTGTGAGCATTTATTACTAAAATGA
TCTAACTTTCG

NNCCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTTCAGCAGCAATCTGGGTTTTGCCTTTGTAAGCCCCT
GAAAAATGTGACTTGAGCCATTTTCTGAAAACGCAGAGATGAGAGTGCAT
TAACTCAGTCAGTATTTATTTAAAGCTTTCTTCAAATTTGGTTTTAACCT
GTAGTAGTGGTCTTTTTCTCGGGCAGTGGGATTAACATGAACTTTGCAAA
AACATACACTAAAGCTTCCAATGGAATTGCAAGAGTTCACAGAAAATTTA
GTGGAAGGAGGTAAATTATCACTACATTTAAGTTATGTAATTTTGCACTT
GATAAGAACAAATTGATAATTTAATATAACAGTCTCATATGAAAGTGTTA
AAATAAAAATTTAAGTAAAATTTGCTTTATTGCACAAATATATTAACAAG
AAGCATTTAAGGACTACATTTGTAAACAACTGGAGAAGAATGTAATTAGT
AATCAATATCAGAAAAAAACAAACTATCCTCAAGTTTATGTATAAATTTA
ATGAGTCCCATAAAAATGCAAACAAGCTTGTTTTTATTTATGAGAAGTGA
AGCTGACTCAAATGTCACATGGAAAACAAATAACACTAAAAAAAAATCTC
TTTGTGAAAAAAATATGGTGACAGGGAATATTCCTGGGAGATTTTACTCT
CTGTGAAAGTTCCCA

Query= MSMg01no474_p13.g1 MSMg01no474_p13.g1 CHROMAT_FILE:
MSMg01no474_p13.g1 PHD_FILE: MSMg01no474_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:36 2005
         (610 letters)



>mm_chr2_43515896_43516907
          Length = 1012

 Score = 1127 bits (583), Expect = 0.0
 Identities = 605/613 (98%), Gaps = 4/613 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgggttttgcctttgtaagcccctgaaaaatgtgacttgagccattttctgaaaacgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tctgggttttgcctttgtaagcccctgaaaaatgtgacttgagccattttctgaaaacgc 753

                                                                       
Query: 61  agagatgagagtgcattaactcagtcagtatttatttaaagctttcttcaaatttggttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 752 agagatgagagtgcattaactcagtcagtatttatttaaagctttcttcaaatttggctt 693

                                                                       
Query: 121 taacctgtagtagtggtctttttctcgggcagtgggattaacatgaactttgcaaaaaca 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 692 taacctgtagtagtggtctttttctcgggcagtgggattaacatgaactttgcaaaaata 633

                                                                       
Query: 181 tacactaaagcttccaatggaattgcaagagttcacagaaaatttagtggaaggaggtaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tacactaaagcttccaatggaattgcaagagttcacagaaaatttagtggaaggaggtaa 573

                                                                       
Query: 241 attatcactacatttaagttatgtaattttgcacttgataagaacaaattgataatttaa 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 attattactacatttaagttatgtaattttgcacttgataagaacaaattgataatttaa 513

                                                                       
Query: 301 tataacagtctcatatgaaagtgttaaaataaaaatttaagtaaaatttgctttattgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tataacagtctcatatgaaagtgttaaaataaaaatttaagtaaaatttgctttattgca 453

                                                                       
Query: 361 caaatatattaacaagaagcatttaaggactacatttgtaaacaactggagaagaatgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caaatatattaacaagaagcatttaaggactacatttgtaaacaactggagaagaatgta 393

                                                                       
Query: 421 attagtaatcaatatcagaaaaaaacaaactatcctcaagtttatgtataaatttaatga 480
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 attagtaatcaatatcag-aaaaaacaaactatcctcaagtttatgtataaatttaatga 334

                                                                       
Query: 481 gtcccataaaaatgcaaacaagcttgtttttatttatgagaagtgaagctgactcaaatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtcccataaaaatgcaaacaagcttgtttttatttatgagaagtgaagctgactcaaatg 274

                                                                       
Query: 541 tcacatggaaaacaaataacact--aaaaaaaaatctctttgtg-aaaaaaatatggtga 597
           |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||
Sbjct: 273 tcacatggaaaacaaataacactaaaaaaaaaaatctctttgtgaaaaaaaatatggtga 214

                        
Query: 598 cagggaatattcc 610
           |||| ||||||||
Sbjct: 213 caggaaatattcc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1012
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1002
Effective search space:   601200
Effective search space used:   601200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)