Query= MSMg01no475_c17.b1 MSMg01no475_c17.b1 CHROMAT_FILE:
MSMg01no475_c17.b1 PHD_FILE: MSMg01no475_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(503 letters)
>mm_chr2_93336144_93337046
Length = 903
Score = 739 bits (382), Expect = 0.0
Identities = 397/402 (98%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 1 ctgtgccacaacccaaacacgtggcttctaaggcccctggacaggttgagacagacaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctgtgccacaacccaaacacgtggcttctaaggcccctggacaggttgagacagacaaca 342
Query: 61 gaagctcggcggccacatctgcttcttcctggaagagacaccaagtatggggacacaaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gaagctcggcggccacatctgcttcttcctggaagagacaccaagtatggggacacaaat 282
Query: 121 cactgacagaggatggcagagctggggacgggggagcccttgggatatttggtggcttcc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cactgacagaggatggcagacctggggacgggggagcccttgggatatttggtggcttcc 222
Query: 181 aatgatctgtgacagtctttttgatgtttatattgattgtcaagtaggacctaaaatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aatgatctgtgacagtctttttgatgtttatattgattgtcaagtaggacctaaaatcag 162
Query: 241 aaagaaaggagttctgtttgcatgcctgtaggtcatctagattagcttaatccagacagg 300
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aaagaaaggag-cctgcttgcatgcctgtaggtcatctagattagcttaatccagacagg 103
Query: 301 aagaccctcgctaaatgggcagcgccatcacattaggatgcttttgccagggtattttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 aagaccctcgctaaatgggcagcgccatcacattaggatgcttttgccagggtattttgt 43
Query: 361 ctcagcaacagaaaatacctaagaccctggtgttggggagaa 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ctcagcaacagaaaatacctaagaccctggtgttggggagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_c17.g1 MSMg01no475_c17.g1 CHROMAT_FILE:
MSMg01no475_c17.g1 PHD_FILE: MSMg01no475_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(266 letters)
>mm_chr2_93197718_93198382
Length = 665
Score = 468 bits (242), Expect = e-136
Identities = 260/266 (97%), Gaps = 2/266 (0%)
Strand = Plus / Plus
Query: 1 cctttgcttctctgaacctctgctgtactagcagcaaaagacagatactgttgccccctc 60
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||
Sbjct: 201 cctttgcttctctgaacctctgctgcactagcagcaaaagacggatactgttgcccc-tc 259
Query: 61 ctacacagagaaagaggaataagtgatgaattcctgtgggtctggttaagagtgaaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctacacagagaaagaggaataagtgatgaattcctgtgggtctggttaagagtgaaggtg 319
Query: 121 gtgagccgggcatggtggcgcatgcgctcgggaggcagaggcaggtggatttctgagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgagccgggcatggtggcgcatgcgctcgggaggcagaggcaggtggatttctgagttc 379
Query: 181 aaggccagcctggtctacaaagtgagttccaggacagccagggctacacatataaactct 240
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 380 aaggccagcctggtctacaaagtgagttccaggacagccagggctacacagagaaactct 439
Query: 241 gtctcgaaaaaccacaaaaaaaaaaa 266
|||||||||||||| |||||||||||
Sbjct: 440 gtctcgaaaaacca-aaaaaaaaaaa 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 266
Length of database: 665
Length adjustment: 9
Effective length of query: 257
Effective length of database: 656
Effective search space: 168592
Effective search space used: 168592
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
